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Protein

DNA polymerase

Gene

UL30h

Organism
Gallid herpesvirus 2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotation, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymeraseUniRule annotation (EC:2.7.7.7UniRule annotation)
Gene namesi
Name:UL30hImported
OrganismiGallid herpesvirus 2Imported
Taxonomic identifieri10390 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeMardivirus

Structurei

3D structure databases

ProteinModelPortaliQ69281.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini168 – 533DNA_pol_B_exo1InterPro annotationAdd BLAST366
Domaini591 – 1148DNA_pol_BInterPro annotationAdd BLAST558

Sequence similaritiesi

Belongs to the DNA polymerase type-B family.UniRule annotation

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q69281-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVDGTKTFF NPYIGARKRS LEARNGLSFS TGQNYDEKNN RRDRNSITYV
60 70 80 90 100
TTIDEFKYIA PKCLDDKDVK QKGTHIGKLK RSPVLYKNGE EYVFLNFEDC
110 120 130 140 150
EDVWPRRCSI WNNRSFLPAD FDPRFSRFHV YDMIETVEFA SAAIDRDKNR
160 170 180 190 200
FLELLRPMGT IVTMMGITEC GKRVAVHVYG IKPYFYMRKV DTDTICGTRC
210 220 230 240 250
PRELAEKLAN VVRSSVNEVA NAKRFCTPVT RTVSADCFEV DVVQRKDIYY
260 270 280 290 300
YGTGHDEFYR VKSQSGKFIT LLCDNFYPSI IKYEGNIDAI TRMVLDNNGF
310 320 330 340 350
STFGWYSFKV GNNGEKVQVR APCHHCTSCD IEINCTVDNL IGYPEDDAWP
360 370 380 390 400
DYKLLCFDIE CKSGGVNECA FPCATNEEDV VIQISCLLYS INTKQLEHAL
410 420 430 440 450
LFALGACDLP QTFKETFQSS YNILPIVLEF DSEFELLLAF MTFIKQYAPE
460 470 480 490 500
FVTGYNIVNF DWAFIVTKLT TVYNMRLDGY GVVNQKGMFK VWDAGTNRFQ
510 520 530 540 550
KKGKFKATGM ITLDMYSIAT EKLKLQSYKL DVVAEAALGE RKKELSYKEI
560 570 580 590 600
PSHFAAGPEK RGIIGEYCLQ DSLLVGKLFF KYIPHLELSA IAKLAGILLS
610 620 630 640 650
KAIFDGQQIR VYTCLLRLEI DGFILPEKNK KFAETVSLTC EEDQTEICEH
660 670 680 690 700
DSPQEPIHNI KQSSLCHSNS GRTIGYQGAK VLDPISGFHV HPVMVFDFAS
710 720 730 740 750
LYPSIIQAHN LCFTTLVHDD TNLSNLRPQD DYLEINVQGK LLRFVKPHIR
760 770 780 790 800
ESLLAILLKD WLAMRKAIRA KIPESCDEIA VLLDKQQAAI KVVCNSVYGF
810 820 830 840 850
CGVSNGLLPC IDVAATVTTI GRNMLLTVRD YIHKQWGTRD ALLREFPNLS
860 870 880 890 900
NFMRPEDYSV SVIYGDTDSV FIKFKGVDIH GLVTTGDDMA KRVSSDLFPK
910 920 930 940 950
PIKLECEKTF NKLLLITKKK YMGTIHGGRM LMKGVDIVRK NNCRFINTYA
960 970 980 990 1000
KKLSDLLFLD DTVAKAAATV AEKPPXFWAT SPLPEGLNSF GGVLAEAYTR
1010 1020 1030 1040 1050
MMINNITEVE DFAMSAELSR PPDAYTNKRI PHLTVYYKLA MRSEQLPVVK
1060 1070 1080 1090 1100
DRISYVIAAA TPEVVRDSAR VAEFRGELDL CHQNSNTSCP GDSVMTNKET
1110 1120 1130 1140 1150
YVRHSPRNKL LISDMAEDPK YLLANNIPLN TDYYLSHLLG TLCVTFKALF
1160 1170 1180
GNDVKITETV LRRFIPETFT EDCSYTERLQ
Length:1,180
Mass (Da):133,932
Last modified:November 1, 1996 - v1
Checksum:i0F2B5D922D000366
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L40431 Genomic DNA. Translation: AAA79862.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L40431 Genomic DNA. Translation: AAA79862.1.

3D structure databases

ProteinModelPortaliQ69281.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ69281_9ALPH
AccessioniPrimary (citable) accession number: Q69281
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.