Q69016 (VP2_SVM93) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein VP2

Alternative name(s):
Minor capsid protein

Gene names

ORF Names:

ORF2

Organism

Sapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)

Taxonomic identifier

82659 [NCBI]

Taxonomic lineage

Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Caliciviridae › Sapovirus › Sapporo virus › Sapovirus GI

Virus host

Homo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length	165 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May be a minor structural protein present in one or two copies per virion. May play a role in RNA genome packaging By similarity.
Subcellular location	Virion. Host cytoplasm By similarity.
Miscellaneous	Translated by a ribosomal termination-reinitiation process from the bicistronic genomic RNA.
Sequence similarities	Belongs to the sapovirus VP2 family.

Ontologies

Keywords
Cellular component	Host cytoplasm Virion
Gene Ontology (GO)
Cellular_component	host cell cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell virion Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 165	165	Protein VP2		PRO_0000341652

Sequences

	Sequence		Length	Mass (Da)
	Q69016 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 7C3DF91B35AADA6B	FASTA	165	17,847
	10 20 30 40 50 60 MSWLVGALQT FGSLADVAGT VSNIVYQQRQ AAQLEKQNEL METWMNKQEA LQKSQMELTR 70 80 90 100 110 120 DLSINGPAAR VQSALDAGFD EVSARRIAGS GERVIWGNLD RPIMHAGTMD SIRQTKHLDS 130 140 150 160 LSHSLATFKN GTPFGKPAPP TTKFGKPQAT TAQINIGHNP GSSSV

References

[1]	"Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses." Liu B.L., Clarke I.N., Caul E.O., Lambden P.R. Arch. Virol. 140:1345-1356(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	X86560 Genomic RNA. Translation: CAA60261.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR008437. Minor_structural_calicivir. [Graphical view]
Pfam	PF05752. Calici_MSP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

VP2_SVM93

Accession

Primary (citable) accession number: Q69016

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 1, 2008
Last sequence update:	November 1, 1996
Last modified:	April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program