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Q69016

- VP2_SVM93

UniProt

Q69016 - VP2_SVM93

Protein

Protein VP2

Gene

ORF2

Organism
Sapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    May be a minor structural protein present in one or two copies per virion. May play a role in RNA genome packaging By similarity.By similarity

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein VP2
    Alternative name(s):
    Minor capsid protein
    Gene namesi
    ORF Names:ORF2
    OrganismiSapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
    Taxonomic identifieri82659 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell
    2. virion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 165165Protein VP2PRO_0000341652Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the sapovirus VP2 family.Curated

    Family and domain databases

    InterProiIPR008437. Minor_structural_calicivir.
    [Graphical view]
    PfamiPF05752. Calici_MSP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q69016-1 [UniParc]FASTAAdd to Basket

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    MSWLVGALQT FGSLADVAGT VSNIVYQQRQ AAQLEKQNEL METWMNKQEA    50
    LQKSQMELTR DLSINGPAAR VQSALDAGFD EVSARRIAGS GERVIWGNLD 100
    RPIMHAGTMD SIRQTKHLDS LSHSLATFKN GTPFGKPAPP TTKFGKPQAT 150
    TAQINIGHNP GSSSV 165
    Length:165
    Mass (Da):17,847
    Last modified:November 1, 1996 - v1
    Checksum:i7C3DF91B35AADA6B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X86560 Genomic RNA. Translation: CAA60261.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X86560 Genomic RNA. Translation: CAA60261.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR008437. Minor_structural_calicivir.
    [Graphical view ]
    Pfami PF05752. Calici_MSP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses."
      Liu B.L., Clarke I.N., Caul E.O., Lambden P.R.
      Arch. Virol. 140:1345-1356(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP2_SVM93
    AccessioniPrimary (citable) accession number: Q69016
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 2008
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Translated by a ribosomal termination-reinitiation process from the bicistronic genomic RNA.

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3