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Q69015

- VP3_SVM93

UniProt

Q69015 - VP3_SVM93

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Protein
Uncharacterized protein VP3
Gene
ORF3
Organism
Sapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
Status
Reviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein VP3
Gene namesi
ORF Names:ORF3
OrganismiSapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
Taxonomic identifieri82659 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 161161Uncharacterized protein VP3
PRO_0000341653Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the sapovirus VP3 family.

Family and domain databases

InterProiIPR009949. Sapovirus_VP3.
[Graphical view]
PfamiPF07349. DUF1478. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative initiation. Align

Isoform Uncharacterized protein VP3 (identifier: Q69015-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

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MAPTQSQSKA TTQWSLTRLA QQVRPHPTLL LLIRSNPMGP HSAWSWLLPL    50
VQSNPMSLRQ YATALQSFVL LLGTTGCPRE LFLDLYRFIP TLTRTLLTSL 100
GCGPGGAVVL RSGYRSLVLA CSLGASLLLS YHQGLIPRPS GTQACCLTLS 150
LMLASLSQFL S 161

Note: Produced by alternative initiation from the subgenomic RNA.

Length:161
Mass (Da):17,469
Last modified:November 1, 1996 - v1
Checksum:i73081E070940C8A8
GO
Isoform Subgenomic capsid protein (identifier: Q69014-2) [UniParc]FASTAAdd to Basket

Also known as: VP1

The sequence of this isoform can be found in the external entry Q69014.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.

Note: Produced from the subgenomic RNA.

Length:561
Mass (Da):60,115
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X86560 Genomic RNA. Translation: CAA60260.1.

Keywords - Coding sequence diversityi

Alternative initiation

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X86560 Genomic RNA. Translation: CAA60260.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR009949. Sapovirus_VP3.
[Graphical view ]
Pfami PF07349. DUF1478. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses."
    Liu B.L., Clarke I.N., Caul E.O., Lambden P.R.
    Arch. Virol. 140:1345-1356(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP3_SVM93
AccessioniPrimary (citable) accession number: Q69015
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: November 1, 1996
Last modified: April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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