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Q69015

- VP3_SVM93

UniProt

Q69015 - VP3_SVM93

Protein

Uncharacterized protein VP3

Gene

ORF3

Organism
Sapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein VP3
    Gene namesi
    ORF Names:ORF3
    OrganismiSapporo virus (strain Human/United Kingdom/Manchester/1993) (Hu/SV/Man/1993/UK)
    Taxonomic identifieri82659 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 161161Uncharacterized protein VP3PRO_0000341653Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the sapovirus VP3 family.Curated

    Family and domain databases

    InterProiIPR009949. Sapovirus_VP3.
    [Graphical view]
    PfamiPF07349. DUF1478. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative initiation. Align

    Isoform Uncharacterized protein VP3 (identifier: Q69015-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

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    MAPTQSQSKA TTQWSLTRLA QQVRPHPTLL LLIRSNPMGP HSAWSWLLPL    50
    VQSNPMSLRQ YATALQSFVL LLGTTGCPRE LFLDLYRFIP TLTRTLLTSL 100
    GCGPGGAVVL RSGYRSLVLA CSLGASLLLS YHQGLIPRPS GTQACCLTLS 150
    LMLASLSQFL S 161

    Note: Produced by alternative initiation from the subgenomic RNA.

    Length:161
    Mass (Da):17,469
    Last modified:November 1, 1996 - v1
    Checksum:i73081E070940C8A8
    GO
    Isoform Subgenomic capsid protein (identifier: Q69014-2) [UniParc]FASTAAdd to Basket

    Also known as: VP1

    The sequence of this isoform can be found in the external entry Q69014.
    Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.

    Note: Produced from the subgenomic RNA.

    Length:561
    Mass (Da):60,115
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X86560 Genomic RNA. Translation: CAA60260.1.

    Keywords - Coding sequence diversityi

    Alternative initiation

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X86560 Genomic RNA. Translation: CAA60260.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR009949. Sapovirus_VP3.
    [Graphical view ]
    Pfami PF07349. DUF1478. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Human enteric caliciviruses have a unique genome structure and are distinct from the Norwalk-like viruses."
      Liu B.L., Clarke I.N., Caul E.O., Lambden P.R.
      Arch. Virol. 140:1345-1356(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP3_SVM93
    AccessioniPrimary (citable) accession number: Q69015
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 2008
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3