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Protein

UPF0235 protein RT0827

Gene

RT0827

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-867-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0235 protein RT0827UniRule annotation
Gene namesi
Ordered Locus Names:RT0827
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000000604 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 105105UPF0235 protein RT0827PRO_0000278002Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0827.

Structurei

3D structure databases

ProteinModelPortaliQ68Y09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0235 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410856B. Bacteria.
COG1872. LUCA.
HOGENOMiHOG000019209.
KOiK09131.
OMAiVIINNIQ.
OrthoDBiEOG6JX7MZ.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68Y09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKFYIYNNF KNEALINIKV KPYSKQNLIN NFVIINNIPY IKLSITAAPE
60 70 80 90 100
QGKANEGIIN YLAKEWKLSR SSIEIIKGHT HSLKTILIKN INEDYLNLII

NSYIK
Length:105
Mass (Da):12,198
Last modified:October 11, 2004 - v1
Checksum:iC0BCFFEB672551B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04281.1.
RefSeqiWP_011191255.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04281; AAU04281; RT0827.
KEGGirty:RT0827.
PATRICi17910906. VBIRicTyp34752_0844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04281.1.
RefSeqiWP_011191255.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68Y09.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0827.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU04281; AAU04281; RT0827.
KEGGirty:RT0827.
PATRICi17910906. VBIRicTyp34752_0844.

Phylogenomic databases

eggNOGiENOG410856B. Bacteria.
COG1872. LUCA.
HOGENOMiHOG000019209.
KOiK09131.
OMAiVIINNIQ.
OrthoDBiEOG6JX7MZ.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-867-MONOMER.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiY827_RICTY
AccessioniPrimary (citable) accession number: Q68Y09
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: October 11, 2004
Last modified: November 11, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.