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Protein

UPF0235 protein RT0827

Gene

RT0827

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-867-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0235 protein RT0827UniRule annotation
Gene namesi
Ordered Locus Names:RT0827
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 105105UPF0235 protein RT0827PRO_0000278002Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ68Y09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0235 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1872.
HOGENOMiHOG000019209.
KOiK09131.
OMAiVIINNIQ.
OrthoDBiEOG6JX7MZ.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68Y09-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNKFYIYNNF KNEALINIKV KPYSKQNLIN NFVIINNIPY IKLSITAAPE
60 70 80 90 100
QGKANEGIIN YLAKEWKLSR SSIEIIKGHT HSLKTILIKN INEDYLNLII

NSYIK
Length:105
Mass (Da):12,198
Last modified:October 11, 2004 - v1
Checksum:iC0BCFFEB672551B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04281.1.
RefSeqiYP_067763.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04281; AAU04281; RT0827.
GeneIDi2958993.
KEGGirty:RT0827.
PATRICi17910906. VBIRicTyp34752_0844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04281.1.
RefSeqiYP_067763.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68Y09.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU04281; AAU04281; RT0827.
GeneIDi2958993.
KEGGirty:RT0827.
PATRICi17910906. VBIRicTyp34752_0844.

Phylogenomic databases

eggNOGiCOG1872.
HOGENOMiHOG000019209.
KOiK09131.
OMAiVIINNIQ.
OrthoDBiEOG6JX7MZ.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-867-MONOMER.

Family and domain databases

Gene3Di3.30.1200.10. 1 hit.
HAMAPiMF_00634. UPF0235.
InterProiIPR003746. DUF167.
[Graphical view]
PfamiPF02594. DUF167. 1 hit.
[Graphical view]
SUPFAMiSSF69786. SSF69786. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiY827_RICTY
AccessioniPrimary (citable) accession number: Q68Y09
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: October 11, 2004
Last modified: January 7, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.