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Q68Y04

- FER_RICTY

UniProt

Q68Y04 - FER_RICTY

Protein

Ferredoxin

Gene

fdxA

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.By similarity

    Cofactori

    Binds 1 4Fe-4S cluster.By similarity
    Binds 1 3Fe-4S cluster.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi9 – 91Iron-sulfur 1 (3Fe-4S)By similarity
    Metal bindingi17 – 171Iron-sulfur 1 (3Fe-4S)By similarity
    Metal bindingi21 – 211Iron-sulfur 2 (4Fe-4S)By similarity
    Metal bindingi40 – 401Iron-sulfur 2 (4Fe-4S)By similarity
    Metal bindingi43 – 431Iron-sulfur 2 (4Fe-4S)By similarity
    Metal bindingi46 – 461Iron-sulfur 2 (4Fe-4S)By similarity
    Metal bindingi50 – 501Iron-sulfur 1 (3Fe-4S)By similarity

    GO - Molecular functioni

    1. 3 iron, 4 sulfur cluster binding Source: UniProtKB-KW
    2. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
    3. electron carrier activity Source: InterPro
    4. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. oxidation-reduction process Source: UniProtKB-KW

    Keywords - Biological processi

    Electron transport, Transport

    Keywords - Ligandi

    3Fe-4S, 4Fe-4S, Iron, Iron-sulfur, Metal-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-857-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ferredoxin
    Gene namesi
    Name:fdxA
    Ordered Locus Names:RT0817
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 110109FerredoxinPRO_0000280965Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi257363.RT0817.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68Y04.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini2 – 30294Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd
    BLAST
    Domaini31 – 60304Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 2 4Fe-4S ferredoxin-type domains.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiCOG1146.
    HOGENOMiHOG000044610.
    KOiK05524.
    OMAiCEKKINI.
    OrthoDBiEOG6CVV7G.

    Family and domain databases

    InterProiIPR001450. 4Fe4S-bd_dom.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR000813. 7Fe_ferredoxin.
    IPR022569. Fd_C.
    [Graphical view]
    PfamiPF11953. DUF3470. 1 hit.
    PF00037. Fer4. 1 hit.
    [Graphical view]
    PRINTSiPR00354. 7FE8SFRDOXIN.
    PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q68Y04-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTYIVTDECV KCKYTDCVEV CPVDCFYEGE FMLVINPDEC IDCGVCVPDC    50
    PIDAIKPESP ELIEWVERAK DFIENQGWKN ITKKKCALPD ADKFKDEQDK 100
    FNKYIIKNMH 110
    Length:110
    Mass (Da):12,782
    Last modified:October 11, 2004 - v1
    Checksum:i8B211DA324280544
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04272.1.
    RefSeqiYP_067754.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04272; AAU04272; RT0817.
    GeneIDi2958963.
    KEGGirty:RT0817.
    PATRICi17910884. VBIRicTyp34752_0834.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04272.1 .
    RefSeqi YP_067754.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68Y04.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0817.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04272 ; AAU04272 ; RT0817 .
    GeneIDi 2958963.
    KEGGi rty:RT0817.
    PATRICi 17910884. VBIRicTyp34752_0834.

    Phylogenomic databases

    eggNOGi COG1146.
    HOGENOMi HOG000044610.
    KOi K05524.
    OMAi CEKKINI.
    OrthoDBi EOG6CVV7G.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-857-MONOMER.

    Family and domain databases

    InterProi IPR001450. 4Fe4S-bd_dom.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR000813. 7Fe_ferredoxin.
    IPR022569. Fd_C.
    [Graphical view ]
    Pfami PF11953. DUF3470. 1 hit.
    PF00037. Fer4. 1 hit.
    [Graphical view ]
    PRINTSi PR00354. 7FE8SFRDOXIN.
    PROSITEi PS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiFER_RICTY
    AccessioniPrimary (citable) accession number: Q68Y04
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3