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Q68Y04

- FER_RICTY

UniProt

Q68Y04 - FER_RICTY

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Protein
Ferredoxin
Gene
fdxA, RT0817
Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions By similarity.

Cofactori

Binds 1 4Fe-4S cluster By similarity.
Binds 1 3Fe-4S cluster By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi9 – 91Iron-sulfur 1 (3Fe-4S) By similarity
Metal bindingi17 – 171Iron-sulfur 1 (3Fe-4S) By similarity
Metal bindingi21 – 211Iron-sulfur 2 (4Fe-4S) By similarity
Metal bindingi40 – 401Iron-sulfur 2 (4Fe-4S) By similarity
Metal bindingi43 – 431Iron-sulfur 2 (4Fe-4S) By similarity
Metal bindingi46 – 461Iron-sulfur 2 (4Fe-4S) By similarity
Metal bindingi50 – 501Iron-sulfur 1 (3Fe-4S) By similarity

GO - Molecular functioni

  1. 3 iron, 4 sulfur cluster binding Source: UniProtKB-KW
  2. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
  3. electron carrier activity Source: InterPro
  4. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. oxidation-reduction process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

3Fe-4S, 4Fe-4S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-857-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin
Gene namesi
Name:fdxA
Ordered Locus Names:RT0817
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 110109Ferredoxin
PRO_0000280965Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0817.

Structurei

3D structure databases

ProteinModelPortaliQ68Y04.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 30294Fe-4S ferredoxin-type 1
Add
BLAST
Domaini31 – 60304Fe-4S ferredoxin-type 2
Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiCOG1146.
HOGENOMiHOG000044610.
KOiK05524.
OMAiCEKKINI.
OrthoDBiEOG6CVV7G.

Family and domain databases

InterProiIPR001450. 4Fe4S-bd_dom.
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
IPR022569. Fd_C.
[Graphical view]
PfamiPF11953. DUF3470. 1 hit.
PF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q68Y04-1 [UniParc]FASTAAdd to Basket

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MTYIVTDECV KCKYTDCVEV CPVDCFYEGE FMLVINPDEC IDCGVCVPDC    50
PIDAIKPESP ELIEWVERAK DFIENQGWKN ITKKKCALPD ADKFKDEQDK 100
FNKYIIKNMH 110
Length:110
Mass (Da):12,782
Last modified:October 11, 2004 - v1
Checksum:i8B211DA324280544
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU04272.1.
RefSeqiYP_067754.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04272; AAU04272; RT0817.
GeneIDi2958963.
KEGGirty:RT0817.
PATRICi17910884. VBIRicTyp34752_0834.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU04272.1 .
RefSeqi YP_067754.1. NC_006142.1.

3D structure databases

ProteinModelPortali Q68Y04.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 257363.RT0817.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU04272 ; AAU04272 ; RT0817 .
GeneIDi 2958963.
KEGGi rty:RT0817.
PATRICi 17910884. VBIRicTyp34752_0834.

Phylogenomic databases

eggNOGi COG1146.
HOGENOMi HOG000044610.
KOi K05524.
OMAi CEKKINI.
OrthoDBi EOG6CVV7G.

Enzyme and pathway databases

BioCyci RTYP257363:GJEQ-857-MONOMER.

Family and domain databases

InterProi IPR001450. 4Fe4S-bd_dom.
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
IPR022569. Fd_C.
[Graphical view ]
Pfami PF11953. DUF3470. 1 hit.
PF00037. Fer4. 1 hit.
[Graphical view ]
PRINTSi PR00354. 7FE8SFRDOXIN.
PROSITEi PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiFER_RICTY
AccessioniPrimary (citable) accession number: Q68Y04
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi