Q68Y02 (Y819_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized deaminase RT0819
EC=3.5.-.-

Gene names

Ordered Locus Names:

RT0819

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group › Rickettsia typhi

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Zinc By similarity.
Sequence similarities	Belongs to the cytidine and deoxycytidylate deaminase family.

Ontologies

Keywords
Ligand	Metal-binding Zinc
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 148	148	Uncharacterized deaminase RT0819		PRO_0000293138
Sites
	Active site	50	1	Proton donor By similarity
	Metal binding	48	1	Zinc; catalytic By similarity
	Metal binding	78	1	Zinc; catalytic By similarity
	Metal binding	81	1	Zinc; catalytic By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q68Y02 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: C78F020EC98F73C4	FASTA	148	16,823
	10 20 30 40 50 60 MEQALKQARL AFDKNEVPVG VVIVYRLNQK IIVSSHNNIE EKNNALCHAE IIAINEACNL 70 80 90 100 110 120 ISSKNLNDYD IYVTLEPCAM CASAISHSRL KRLFYGASDS KQGAVESNLR YFNSSACFHR 130 140 PEIYSGILSE HSRFLMKEFF QKMRSTID

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017197 Genomic DNA. Translation: AAU04274.1.
RefSeq	YP_067756.1. NC_006142.1.
3D structure databases
ProteinModelPortal	Q68Y02.
ModBase	Search...
Protein-protein interaction databases
STRING	257363.RT0819.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU04274; AAU04274; RT0819.
GeneID	2958939.
KEGG	rty:RT0819.
PATRIC	17910888. VBIRicTyp34752_0836.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0590.
HOGENOM	HOG000085050.
KO	K01485.
OMA	MCAGLIV.
ProtClustDB	CLSK871102.
Enzyme and pathway databases
BioCyc	RTYP257363:GJEQ-859-MONOMER.
Family and domain databases
InterPro	IPR016192. APOBEC/CMP_deaminase_Zn-bd. IPR002125. CMP_dCMP_Zn-bd. IPR016193. Cytidine_deaminase-like. [Graphical view]
Pfam	PF00383. dCMP_cyt_deam_1. 1 hit. [Graphical view]
SUPFAM	SSF53927. Cytidine_deaminase-like. 1 hit.
PROSITE	PS00903. CYT_DCMP_DEAMINASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y819_RICTY

Accession

Primary (citable) accession number: Q68Y02

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 10, 2007
Last sequence update:	October 11, 2004
Last modified:	May 29, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program