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Q68XY2

- SECF_RICTY

UniProt

Q68XY2 - SECF_RICTY

Protein

Protein translocase subunit SecF

Gene

secF

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.UniRule annotation

    GO - Molecular functioni

    1. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro

    GO - Biological processi

    1. intracellular protein transmembrane transport Source: UniProtKB-HAMAP
    2. protein targeting Source: UniProtKB-HAMAP
    3. protein transport by the Sec complex Source: UniProtKB-HAMAP

    Keywords - Biological processi

    Protein transport, Translocation, Transport

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-23-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein translocase subunit SecF
    Gene namesi
    Name:secFUniRule annotation
    Ordered Locus Names:RT0022
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. intracellular Source: GOC
    3. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 308308Protein translocase subunit SecFPRO_0000272640Add
    BLAST

    Interactioni

    Subunit structurei

    Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0022.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68XY2.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei23 – 4220HelicalUniRule annotationAdd
    BLAST
    Transmembranei140 – 16021HelicalUniRule annotationAdd
    BLAST
    Transmembranei164 – 18421HelicalUniRule annotationAdd
    BLAST
    Transmembranei194 – 21421HelicalUniRule annotationAdd
    BLAST
    Transmembranei246 – 26621HelicalUniRule annotationAdd
    BLAST
    Transmembranei272 – 29221HelicalUniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SecD/SecF family. SecF subfamily.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0341.
    HOGENOMiHOG000245916.
    KOiK03074.
    OMAiEEMLIKF.
    OrthoDBiEOG676Z5R.

    Family and domain databases

    HAMAPiMF_01464_B. SecF_B.
    InterProiIPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    [Graphical view]
    PfamiPF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view]
    PRINTSiPR01755. SECFTRNLCASE.
    TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q68XY2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQIYPLRFVP NKINFDFMNF KKVSYSFSII LSLISLIWIG IYKFNFGIDF    50
    VGGIVIEVRL DRAPDLPKMR AVLSALGIGE VVLQNFESEH DLSIRFGSSS 100
    EENLMKNIDI IKTSLRNNFP YNFEYRKVDF VGPQVGRHLI EAGAMAMLFS 150
    FLAIMVYIGV RFEWYFGFGI LIALVHDVIL ALGFMSITKL DFNLSTIAAV 200
    LTIIGYSVND SVVIYDRIRE NLRKYHKKNI TEIINLSINE TLSRTILTVI 250
    TTLLANLALI LFGGKAIHSF SVLVFFGIIA GTYSSIFISA PILTIFANRK 300
    FNKKVIER 308
    Length:308
    Mass (Da):34,940
    Last modified:October 11, 2004 - v1
    Checksum:i7E1FB0CC35708C73
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU03510.1.
    RefSeqiYP_066992.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU03510; AAU03510; RT0022.
    GeneIDi2958489.
    KEGGirty:RT0022.
    PATRICi17909194. VBIRicTyp34752_0020.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU03510.1 .
    RefSeqi YP_066992.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68XY2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0022.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU03510 ; AAU03510 ; RT0022 .
    GeneIDi 2958489.
    KEGGi rty:RT0022.
    PATRICi 17909194. VBIRicTyp34752_0020.

    Phylogenomic databases

    eggNOGi COG0341.
    HOGENOMi HOG000245916.
    KOi K03074.
    OMAi EEMLIKF.
    OrthoDBi EOG676Z5R.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-23-MONOMER.

    Family and domain databases

    HAMAPi MF_01464_B. SecF_B.
    InterProi IPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    [Graphical view ]
    Pfami PF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view ]
    PRINTSi PR01755. SECFTRNLCASE.
    TIGRFAMsi TIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiSECF_RICTY
    AccessioniPrimary (citable) accession number: Q68XY2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2007
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3