Reviewed, UniProtKB/Swiss-Prot Q68XX5 (Y029_RICTY)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein RT0029

Gene names

Ordered Locus Names:

RT0029

Organism

Rickettsia typhi [Complete proteome] [HAMAP]

Taxonomic identifier

785 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	886 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the trbL/virB6 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	conjugation with cellular fusion Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential
	Chain	21 – 886	866	Uncharacterized protein RT0029		PRO_0000269226
Regions
	Transmembrane	520 – 540	21	Potential
	Transmembrane	563 – 583	21	Potential
	Transmembrane	609 – 629	21	Potential
	Transmembrane	647 – 667	21	Potential
	Transmembrane	680 – 700	21	Potential
	Transmembrane	771 – 791	21	Potential

Sequences

	Sequence		Length	Mass (Da)
	Q68XX5-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 017EDA80D1BAB28D	FASTA	886	99,433
	10 20 30 40 50 60 MKILKSLVLL VLFIVMPAKA HDTFSWMSTS FSGLKGLFGC LEVPEFTSFQ ESNIGINLSK 70 80 90 100 110 120 AGTWQSTGHT VEKGKLLKIN WSIAGVTTEP RKYLVLYRID PRFSTPQVFI KTYNYSKLQF 130 140 150 160 170 180 EALGFPRFVT NSNSSIPGAI PPDKELDALS FTKMSDSIKY YARNNVKIEV KAGDVVNISL 190 200 210 220 230 240 VSKDNFFTSN TLDNILTEEL DSSIFAASAL YTQSNLGNFD NRIIYASAKE VCDIIDPSRD 250 260 270 280 290 300 PNKPSGCSGT GATTKYKSIN SNEALVGKPM MIGAVHNFMG LINSCPEHSG INTRPACYYD 310 320 330 340 350 360 QGRGMIIKVG GQVIKGRDQS FVKSGRNSFI YYQATRNGIM DFTSDWQVNN MFSNSVLMSD 370 380 390 400 410 420 WIRRFLNYPS FIDYINKNDW SANFLYFGRY SMIVEIGNGA NSISSDVQQN INLEYLITYD 430 440 450 460 470 480 GTLPDPSIRG TPVDYNFSAD APKDGYLWLR VVNPNSNIQG VVSVNYANYT GTTWFSDIVY 490 500 510 520 530 540 NGAIKPITDQ FRTFSKNFYI KLIKNSAVQN IAKGSLTLYV IIFGLMFVAG TLKLTAIEVI 550 560 570 580 590 600 TRICKIAIVA FLIREESWSF FNTYFFSVFT DGIDFFITNV VGATSSRSNI FGFIDPIFDK 610 620 630 640 650 660 YTNGRIWGLL FIELLQIHNG LAFIAIITIY SLITYFRAIL EVIIGYIIAF IGVTVMISLA 670 680 690 700 710 720 PFFIILMLFE KTKSLFDNWI STLLSYVVQP TILLIFFLLI DQVLSEQLLK VVVRACWDTL 730 740 750 760 770 780 IPIKIGLDLT NLSIPINFSF TLPFLPGIPF YVPDVPEINR SNIFNNNTNT FLVLFTTALL 790 800 810 820 830 840 FYVYCLMSYG LVTFVNIVVG MLTNVTPARI SGNYQARSDP VGAVMQDIGS VTTPIKNASM 850 860 870 880 VPARIFKDKI IDQNYKAKKL EGGVEFTNKF FAKRNDVTKK EEGVRE

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE017197 Genomic DNA. Translation: AAU03517.1.
RefSeq	YP_066999.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2959061.
GenomeReviews	Gene locus RT0029 in contig AE017197_GR.
KEGG	rty:RT0029.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q68XX5.
OMA	VMISLAP
Enzyme and pathway databases
BioCyc	RTYP257363:RT0029-MON.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y029_RICTY

Accession

Primary (citable) accession number: Q68XX5

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	October 11, 2004
Last modified:	November 3, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)