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Q68XX4 (Y030_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein RT0030
Gene names
Ordered Locus Names:RT0030
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length971 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the TrbL/VirB6 family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential
Chain25 – 971947Uncharacterized protein RT0030
PRO_0000269216

Regions

Transmembrane611 – 63121Helical; Potential
Transmembrane721 – 74121Helical; Potential
Transmembrane753 – 77321Helical; Potential
Transmembrane795 – 81521Helical; Potential
Transmembrane832 – 85221Helical; Potential
Transmembrane865 – 88521Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q68XX4 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 36FAE10E88B2262D

FASTA971108,876
        10         20         30         40         50         60 
MQSNLLKVLG VLAIVATLVC FIFAALGMIG AVRIGNGCYM RYSKDGNGGA DSITNTITLN 

        70         80         90        100        110        120 
ANANYFNISK MLPDGTTKLI PDPNRYGEWL NTQVLVEKNQ QVNLQVVGQV SLCLAYLPKN 

       130        140        150        160        170        180 
NLQFTERTRP GKSNLDDSNQ MIPIPRVQDA NSPPVSLIMD AKNNEWRNIA ELYANDKVLV 

       190        200        210        220        230        240 
SVSPNFANTD ATVDDVFKGV KVTKDCTQGK TSYYPICGKY SIYSGKYVTA CELKQNYWKG 

       250        260        270        280        290        300 
NVHREECYCV FGCIYQEENE QWICDAANSA SHCCTSLVCD SLPAWINHYS NMPEAYKDDG 

       310        320        330        340        350        360 
SFTFSWSDKS GNLLIDYQDL QCSNNVQIPP NGECPDIVDN RNPKDKDYIG GVHCTSGICK 

       370        380        390        400        410        420 
DGDFQKNRKF WYTADGKGGK GPTGLIYQMN NTGSVSQALP SNLEFAKFVP ETEQPPEYKD 

       430        440        450        460        470        480 
KNGKYLYKVI YNIPFNSNIE KSYLQYRLWS PTSQDSSKNT GGYVLNIKQT KCYRENGNSF 

       490        500        510        520        530        540 
KDIFDDRGRV QYIIVQSSEN PNTSGKTYAP QGINVDSDGK SHFNANEAGY IWMKILNDPS 

       550        560        570        580        590        600 
NNLKDYKDSE GSYKVHFSTS LKVGSFTIKV MNPLLQLFKT KVQGAATSIF KNMVCYKSTD 

       610        620        630        640        650        660 
NTSCTNFFTY IKAILILYVM TYGAMFLLGF AKINQKELVI RIAKIGMVSG LINGNTFEFF 

       670        680        690        700        710        720 
NNYLFDAITN FSDSIIANMS GYSLFTSTNT ISNPFMFLDA IMSKIFFSQT FIAQLLSLLS 

       730        740        750        760        770        780 
LGLSGIIYFI ITFIAVCIVI ITTLRAIAVY IMAFMATCIL IGIAPLFISF LLFDFTRYLF 

       790        800        810        820        830        840 
DNWVRFTIRY MIEPVVMMAG IIVLTQLFTI YLDFVLGYSV CWKCTLPIKI PFIGTILPIA 

       850        860        870        880        890        900 
LLNVPIFCIN WFAPWGMDYM SGMMGVNMQN IVALVIIAYG MYGYVEFSGR MVAKLTSAAG 

       910        920        930        940        950        960 
PSATQIGDRM SHDAGQKTLS QIGMDYRTRK GITSRAKSRL KQRNRTLEHA EQNSKKYMKK 

       970 
IGENTNEGTL K 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU03518.1.
RefSeqYP_067000.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68XX4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0030.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU03518; AAU03518; RT0030.
GeneID2959327.
KEGGrty:RT0030.
PATRIC17909210. VBIRicTyp34752_0028.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3704.
HOGENOMHOG000273009.
KOK03201.
OMAYLFDNWV.
OrthoDBEOG64FK96.
ProtClustDBCLSK870746.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-31-MONOMER.

Family and domain databases

InterProIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamPF04610. TrbL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY030_RICTY
AccessionPrimary (citable) accession number: Q68XX4
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names