Q68XX4 (Y030_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein RT0030

Gene names

Ordered Locus Names:

RT0030

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	971 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the trbL/virB6 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein secretion by the type IV secretion system Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential
	Chain	25 – 971	947	Uncharacterized protein RT0030		PRO_0000269216
Regions
	Transmembrane	611 – 631	21	Helical; Potential
	Transmembrane	721 – 741	21	Helical; Potential
	Transmembrane	753 – 773	21	Helical; Potential
	Transmembrane	795 – 815	21	Helical; Potential
	Transmembrane	832 – 852	21	Helical; Potential
	Transmembrane	865 – 885	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q68XX4 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 36FAE10E88B2262D	FASTA	971	108,876
	10 20 30 40 50 60 MQSNLLKVLG VLAIVATLVC FIFAALGMIG AVRIGNGCYM RYSKDGNGGA DSITNTITLN 70 80 90 100 110 120 ANANYFNISK MLPDGTTKLI PDPNRYGEWL NTQVLVEKNQ QVNLQVVGQV SLCLAYLPKN 130 140 150 160 170 180 NLQFTERTRP GKSNLDDSNQ MIPIPRVQDA NSPPVSLIMD AKNNEWRNIA ELYANDKVLV 190 200 210 220 230 240 SVSPNFANTD ATVDDVFKGV KVTKDCTQGK TSYYPICGKY SIYSGKYVTA CELKQNYWKG 250 260 270 280 290 300 NVHREECYCV FGCIYQEENE QWICDAANSA SHCCTSLVCD SLPAWINHYS NMPEAYKDDG 310 320 330 340 350 360 SFTFSWSDKS GNLLIDYQDL QCSNNVQIPP NGECPDIVDN RNPKDKDYIG GVHCTSGICK 370 380 390 400 410 420 DGDFQKNRKF WYTADGKGGK GPTGLIYQMN NTGSVSQALP SNLEFAKFVP ETEQPPEYKD 430 440 450 460 470 480 KNGKYLYKVI YNIPFNSNIE KSYLQYRLWS PTSQDSSKNT GGYVLNIKQT KCYRENGNSF 490 500 510 520 530 540 KDIFDDRGRV QYIIVQSSEN PNTSGKTYAP QGINVDSDGK SHFNANEAGY IWMKILNDPS 550 560 570 580 590 600 NNLKDYKDSE GSYKVHFSTS LKVGSFTIKV MNPLLQLFKT KVQGAATSIF KNMVCYKSTD 610 620 630 640 650 660 NTSCTNFFTY IKAILILYVM TYGAMFLLGF AKINQKELVI RIAKIGMVSG LINGNTFEFF 670 680 690 700 710 720 NNYLFDAITN FSDSIIANMS GYSLFTSTNT ISNPFMFLDA IMSKIFFSQT FIAQLLSLLS 730 740 750 760 770 780 LGLSGIIYFI ITFIAVCIVI ITTLRAIAVY IMAFMATCIL IGIAPLFISF LLFDFTRYLF 790 800 810 820 830 840 DNWVRFTIRY MIEPVVMMAG IIVLTQLFTI YLDFVLGYSV CWKCTLPIKI PFIGTILPIA 850 860 870 880 890 900 LLNVPIFCIN WFAPWGMDYM SGMMGVNMQN IVALVIIAYG MYGYVEFSGR MVAKLTSAAG 910 920 930 940 950 960 PSATQIGDRM SHDAGQKTLS QIGMDYRTRK GITSRAKSRL KQRNRTLEHA EQNSKKYMKK 970 IGENTNEGTL K

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017197 Genomic DNA. Translation: AAU03518.1.
RefSeq	YP_067000.1. NC_006142.1.
3D structure databases
ProteinModelPortal	Q68XX4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2959327.
GenomeReviews	Gene locus RT0030 in contig AE017197_GR.
KEGG	rty:RT0030.
PATRIC	17909210. VBIRicTyp34752_0028.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG586502.
OMA	YLDFVLG.
ProtClustDB	CLSK870746.
Enzyme and pathway databases
BioCyc	RTYP257363:RT0030-MONOMER.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
KO	K03201.
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y030_RICTY

Accession

Primary (citable) accession number: Q68XX4

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	October 11, 2004
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program