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Q68XX3 (Y031_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein RT0031
Gene names
Ordered Locus Names:RT0031
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length674 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the TrbL/VirB6 family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential
Chain25 – 674650Uncharacterized protein RT0031
PRO_0000269211

Regions

Transmembrane226 – 24621Helical; Potential
Transmembrane254 – 27421Helical; Potential
Transmembrane409 – 42921Helical; Potential
Transmembrane436 – 45621Helical; Potential
Transmembrane469 – 48921Helical; Potential
Transmembrane562 – 58221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q68XX3 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 4AE2FCF56DA8B973

FASTA67474,085
        10         20         30         40         50         60 
MKTLKALKIF IIVYISSVSL ESFAGFGESC SNLPITSDGY LETYTAYGYI IRSIDMKDPR 

        70         80         90        100        110        120 
GNCNPYTSSI TFCFKNVEGS TSPCTIYTLN EGDARKISDL STDNNPNLGA NTVLKNIVLT 

       130        140        150        160        170        180 
VKKFGNDLCL AMPTSRGPMP VACKSLNATP APTNPKYENC NIGKSCYTGA NYSQSLINFS 

       190        200        210        220        230        240 
GLAVQCLSET LNKIFFTGNS CSSQDQNSRI THLAAFSTFQ GYLKRIIGAA LILYTMFFAF 

       250        260        270        280        290        300 
NMALNKEYAT TEKITLFIIK FLFVVYFSIG LEPLNFSGGQ TVKENGMLKY GLPLLTGAAP 

       310        320        330        340        350        360 
DFAEMIFNAA GSRGLCQFDN SKYKDGYKFY GLWDAIDCRI GYYLGLDLLY NIDKNGILGH 

       370        380        390        400        410        420 
SVGNGPGGNN KPIPNFDPDS KKDRPHDLSK AGALRFFTVM FGFLMSGHII ILVAGIAFSV 

       430        440        450        460        470        480 
IFLSILLYFI THYLVCMITI YVMTYISPIF IPMVLFTRTK AYFDGWVKVC ISCALQPAVV 

       490        500        510        520        530        540 
AGFIALLITM YDSAIFKNCE FLRYDYEKGD IRFSTFELRL PSIDADKCQE SFGYKMLKYY 

       550        560        570        580        590        600 
AGEGWEEHLL ILFPIKSIVR DVVSILAELL CVLVFSVIFY YFSKSIGRFA ADLTNGPNMD 

       610        620        630        640        650        660 
AVTASPTKIV DLVKKGAAFL QDASSVHAQG KSPVEDKPDI GSKRKDGVQQ GEDSENSSGG 

       670 
ELADLASGSG GGKL 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU03519.1.
RefSeqYP_067001.1. NC_006142.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0031.

Proteomic databases

PRIDEQ68XX3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU03519; AAU03519; RT0031.
GeneID2958597.
KEGGrty:RT0031.
PATRIC17909212. VBIRicTyp34752_0029.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3704.
HOGENOMHOG000010634.
KOK03201.
OMAGYLETDT.
OrthoDBEOG6B8XD4.
ProtClustDBCLSK870745.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-32-MONOMER.

Family and domain databases

InterProIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamPF04610. TrbL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY031_RICTY
AccessionPrimary (citable) accession number: Q68XX3
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names