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Protein

Uncharacterized protein RT0031

Gene

RT0031

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-32-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein RT0031
Gene namesi
Ordered Locus Names:RT0031
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei226 – 24621HelicalSequence AnalysisAdd
BLAST
Transmembranei254 – 27421HelicalSequence AnalysisAdd
BLAST
Transmembranei409 – 42921HelicalSequence AnalysisAdd
BLAST
Transmembranei436 – 45621HelicalSequence AnalysisAdd
BLAST
Transmembranei469 – 48921HelicalSequence AnalysisAdd
BLAST
Transmembranei562 – 58221HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence AnalysisAdd
BLAST
Chaini25 – 674650Uncharacterized protein RT0031PRO_0000269211Add
BLAST

Proteomic databases

PRIDEiQ68XX3.

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0031.

Family & Domainsi

Sequence similaritiesi

Belongs to the TrbL/VirB6 family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG3704.
HOGENOMiHOG000010634.
KOiK03201.
OMAiGYLETDT.
OrthoDBiEOG6B8XD4.

Family and domain databases

InterProiIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamiPF04610. TrbL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q68XX3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTLKALKIF IIVYISSVSL ESFAGFGESC SNLPITSDGY LETYTAYGYI
60 70 80 90 100
IRSIDMKDPR GNCNPYTSSI TFCFKNVEGS TSPCTIYTLN EGDARKISDL
110 120 130 140 150
STDNNPNLGA NTVLKNIVLT VKKFGNDLCL AMPTSRGPMP VACKSLNATP
160 170 180 190 200
APTNPKYENC NIGKSCYTGA NYSQSLINFS GLAVQCLSET LNKIFFTGNS
210 220 230 240 250
CSSQDQNSRI THLAAFSTFQ GYLKRIIGAA LILYTMFFAF NMALNKEYAT
260 270 280 290 300
TEKITLFIIK FLFVVYFSIG LEPLNFSGGQ TVKENGMLKY GLPLLTGAAP
310 320 330 340 350
DFAEMIFNAA GSRGLCQFDN SKYKDGYKFY GLWDAIDCRI GYYLGLDLLY
360 370 380 390 400
NIDKNGILGH SVGNGPGGNN KPIPNFDPDS KKDRPHDLSK AGALRFFTVM
410 420 430 440 450
FGFLMSGHII ILVAGIAFSV IFLSILLYFI THYLVCMITI YVMTYISPIF
460 470 480 490 500
IPMVLFTRTK AYFDGWVKVC ISCALQPAVV AGFIALLITM YDSAIFKNCE
510 520 530 540 550
FLRYDYEKGD IRFSTFELRL PSIDADKCQE SFGYKMLKYY AGEGWEEHLL
560 570 580 590 600
ILFPIKSIVR DVVSILAELL CVLVFSVIFY YFSKSIGRFA ADLTNGPNMD
610 620 630 640 650
AVTASPTKIV DLVKKGAAFL QDASSVHAQG KSPVEDKPDI GSKRKDGVQQ
660 670
GEDSENSSGG ELADLASGSG GGKL
Length:674
Mass (Da):74,085
Last modified:October 11, 2004 - v1
Checksum:i4AE2FCF56DA8B973
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03519.1.
RefSeqiWP_011190506.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03519; AAU03519; RT0031.
KEGGirty:RT0031.
PATRICi17909212. VBIRicTyp34752_0029.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03519.1.
RefSeqiWP_011190506.1. NC_006142.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0031.

Proteomic databases

PRIDEiQ68XX3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU03519; AAU03519; RT0031.
KEGGirty:RT0031.
PATRICi17909212. VBIRicTyp34752_0029.

Phylogenomic databases

eggNOGiCOG3704.
HOGENOMiHOG000010634.
KOiK03201.
OMAiGYLETDT.
OrthoDBiEOG6B8XD4.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-32-MONOMER.

Family and domain databases

InterProiIPR007688. Conjugal_tfr_TrbL/VirB6.
[Graphical view]
PfamiPF04610. TrbL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiY031_RICTY
AccessioniPrimary (citable) accession number: Q68XX3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 11, 2004
Last modified: July 22, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.