Reviewed, UniProtKB/Swiss-Prot Q68XW4 (Y041_RICTY)

Names and origin

Protein names

Recommended name:
    UPF0393 membrane protein RT0041

Gene names

Ordered Locus Names:

RT0041

Organism

Rickettsia typhi [Complete proteome] [HAMAP]

Taxonomic identifier

785 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	259 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Subcellular location	Cell inner membrane; Multi-pass membrane protein By similarity.
Sequence similarities	Belongs to the UPF0393 family.

Ontologies

Keywords
Cellular component	Cell inner membrane Cell membrane Membrane
Domain	Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 259	259	UPF0393 membrane protein RT0041		PRO_0000272625
Regions
	Transmembrane	20 – 40	21	Potential
	Transmembrane	49 – 69	21	Potential
	Transmembrane	148 – 168	21	Potential
	Transmembrane	195 – 215	21	Potential
	Transmembrane	237 – 257	21	Potential

Sequences

	Sequence		Length	Mass (Da)
	Q68XW4-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 316024E0C9D6DAF9	FASTA	259	27,664
	10 20 30 40 50 60 MLLNIANLVG KHTIKFAQSV GIFALFSFIA ISSIIKPPLY LSLIMRQLLF IGFHSLPVVA 70 80 90 100 110 120 MTTFFSGAVL ALQSYTGFSR FSAENSIATV VVLSLTRELG PVLAGLIVAG RVGASIAAEI 130 140 150 160 170 180 ATMKVTEQVD ALYTLSTDPI KYLVCPRVIA AIITMPCLVL IGDVIGVMGG YLVGIYKLNF 190 200 210 220 230 240 NSTAYLTSTF QYLELIDVIS GLVKATVFGF IISIISCYSG YYSGKGAKGV GRATTSAVVN 250 SSILILISNY LITELLFKV

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE017197 Genomic DNA. Translation: AAU03528.1.
RefSeq	YP_067010.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2959349.
GenomeReviews	Gene locus RT0041 in contig AE017197_GR.
KEGG	rty:RT0041.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG564941.
OMA	FSAENSI.
Enzyme and pathway databases
BioCyc	RTYP257363:RT0041-MON.
Family and domain databases
InterPro	IPR003453. DUF140. [Graphical view]
Pfam	PF02405. DUF140. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y041_RICTY

Accession

Primary (citable) accession number: Q68XW4

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 23, 2007
Last sequence update:	October 11, 2004
Last modified:	December 15, 2009
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)