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Reviewed, UniProtKB/Swiss-Prot Q68XW1 (Y044_RICTY)

Last modified November 3, 2009. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein RT0044
Gene names
Ordered Locus Names: RT0044
OrganismRickettsia typhi [Complete proteome] [HAMAP]
Taxonomic identifier785 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length251 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the vacJ family.

Ontologies

Keywords
   DomainSignal
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential
Chain19 – 251233Uncharacterized protein RT0044
PRO_0000263038

Sequences

Sequence LengthMass (Da)Tools
Q68XW1-1 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: F9303E8D3DA5EB36

FASTA25128,463
        10         20         30         40         50         60 
MRILIILSII LCSFFARADL EYIDNDIYNY NGGRNENGCL EVYDPYEKFN RKVFAFNSVL 

        70         80         90        100        110        120 
DHIILRPLAV GYKNITNDYI KARVNSFVSN VYTPLTAVNY GLQLNYDKTI KSVWRFLINT 

       130        140        150        160        170        180 
TLGIGGLFDV ASKVGLQSDR QTFGSTLAHY GVAPGPYLVL PIIGSTNARD MTDSVITNYA 

       190        200        210        220        230        240 
INPLMYYTHN DFDLGILAIS KITDRYVVLP FSDYVMKNST DPYVAIRSAL HRTREASVQY 

       250 
PENFKCPKPK N 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

AE017197 Genomic DNA. Translation: AAU03531.1.
RefSeqYP_067013.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID2958796.
GenomeReviewsGene locus RT0044 in contig AE017197_GR.
KEGGrty:RT0044.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ68XW1.
OMANYNGGRN

Enzyme and pathway databases

BioCycRTYP257363:RT0044-MON.

Family and domain databases

InterProIPR007428. VacJ.
[Graphical view]
PfamPF04333. VacJ. 1 hit.
[Graphical view]
PRINTSPR01805. VACJLIPOPROT.
ProtoNetSearch...

Entry information

Entry nameY044_RICTY
AccessionPrimary (citable) accession number: Q68XW1
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: October 11, 2004
Last modified: November 3, 2009
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents