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Protein

30S ribosomal protein S2

Gene

rpsB

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S2UniRule annotation
Gene namesi
Name:rpsBUniRule annotation
Ordered Locus Names:RT0050
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001342291 – 29530S ribosomal protein S2Add BLAST295

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0050.

Structurei

3D structure databases

ProteinModelPortaliQ68XV5.
SMRiQ68XV5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS2 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CE9. Bacteria.
COG0052. LUCA.
HOGENOMiHOG000071892.
KOiK02967.
OMAiSYIDRAY.
OrthoDBiPOG091H0297.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_00291_B. Ribosomal_S2_B. 1 hit.
InterProiView protein in InterPro
IPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiView protein in Pfam
PF00318. Ribosomal_S2. 1 hit.
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68XV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKISPINIK ELLDAGVHFG HKTSRWNPKM ASYIYGERDD VHIIDLRQSA
60 70 80 90 100
ALMSVALNAI YETVKKDGKI LFVSTKIQAS DIIAEYAEKC GQYYVNNRWL
110 120 130 140 150
GGMLTNWKTI ACSIEKLEKL EKTLESEETR VCYTKKEILD MSRKKDKLLL
160 170 180 190 200
SLAGIRNLNS KPDLLVVIDT NKEHIAINEA VKLNIPIVAV VDTNSNPDNI
210 220 230 240 250
NYPIPGNDDS IRSIRLYCSL FADAALQGLE ESMKVSGVDI GTMQEHTDKA
260 270 280 290
LTSKTISKLK QTKKFSKTQN IDEETNTEFD QALSDACENK NSDNT
Length:295
Mass (Da):33,096
Last modified:October 11, 2004 - v1
Checksum:iF33080E3C336B73D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03537.1.
RefSeqiWP_011190524.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03537; AAU03537; RT0050.
KEGGirty:RT0050.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS2_RICTY
AccessioniPrimary (citable) accession number: Q68XV5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: June 7, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families