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Protein

30S ribosomal protein S2

Gene

rpsB

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-53-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S2UniRule annotation
Gene namesi
Name:rpsBUniRule annotation
Ordered Locus Names:RT0050
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 29529530S ribosomal protein S2PRO_0000134229Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0050.

Structurei

3D structure databases

ProteinModelPortaliQ68XV5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S2P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0052.
HOGENOMiHOG000071892.
KOiK02967.
OMAiRIPDILY.
OrthoDBiEOG6XWV6P.

Family and domain databases

HAMAPiMF_00291_B. Ribosomal_S2_B.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68XV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKISPINIK ELLDAGVHFG HKTSRWNPKM ASYIYGERDD VHIIDLRQSA
60 70 80 90 100
ALMSVALNAI YETVKKDGKI LFVSTKIQAS DIIAEYAEKC GQYYVNNRWL
110 120 130 140 150
GGMLTNWKTI ACSIEKLEKL EKTLESEETR VCYTKKEILD MSRKKDKLLL
160 170 180 190 200
SLAGIRNLNS KPDLLVVIDT NKEHIAINEA VKLNIPIVAV VDTNSNPDNI
210 220 230 240 250
NYPIPGNDDS IRSIRLYCSL FADAALQGLE ESMKVSGVDI GTMQEHTDKA
260 270 280 290
LTSKTISKLK QTKKFSKTQN IDEETNTEFD QALSDACENK NSDNT
Length:295
Mass (Da):33,096
Last modified:October 11, 2004 - v1
Checksum:iF33080E3C336B73D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03537.1.
RefSeqiWP_011190524.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03537; AAU03537; RT0050.
KEGGirty:RT0050.
PATRICi17909252. VBIRicTyp34752_0048.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03537.1.
RefSeqiWP_011190524.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68XV5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0050.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU03537; AAU03537; RT0050.
KEGGirty:RT0050.
PATRICi17909252. VBIRicTyp34752_0048.

Phylogenomic databases

eggNOGiCOG0052.
HOGENOMiHOG000071892.
KOiK02967.
OMAiRIPDILY.
OrthoDBiEOG6XWV6P.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-53-MONOMER.

Family and domain databases

HAMAPiMF_00291_B. Ribosomal_S2_B.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiRS2_RICTY
AccessioniPrimary (citable) accession number: Q68XV5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: July 22, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.