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Q68XV5 (RS2_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S2
Gene names
Name:rpsB
Ordered Locus Names:RT0050
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 29529530S ribosomal protein S2 HAMAP-Rule MF_00291
PRO_0000134229

Sequences

Sequence LengthMass (Da)Tools
Q68XV5 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: F33080E3C336B73D

FASTA29533,096
        10         20         30         40         50         60 
MSKISPINIK ELLDAGVHFG HKTSRWNPKM ASYIYGERDD VHIIDLRQSA ALMSVALNAI 

        70         80         90        100        110        120 
YETVKKDGKI LFVSTKIQAS DIIAEYAEKC GQYYVNNRWL GGMLTNWKTI ACSIEKLEKL 

       130        140        150        160        170        180 
EKTLESEETR VCYTKKEILD MSRKKDKLLL SLAGIRNLNS KPDLLVVIDT NKEHIAINEA 

       190        200        210        220        230        240 
VKLNIPIVAV VDTNSNPDNI NYPIPGNDDS IRSIRLYCSL FADAALQGLE ESMKVSGVDI 

       250        260        270        280        290 
GTMQEHTDKA LTSKTISKLK QTKKFSKTQN IDEETNTEFD QALSDACENK NSDNT 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU03537.1.
RefSeqYP_067019.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68XV5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0050.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU03537; AAU03537; RT0050.
GeneID2958758.
KEGGrty:RT0050.
PATRIC17909252. VBIRicTyp34752_0048.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0052.
HOGENOMHOG000071892.
KOK02967.
OMARYIYCAR.
OrthoDBEOG6XWV6P.
ProtClustDBPRK05299.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-53-MONOMER.

Family and domain databases

HAMAPMF_00291_B. Ribosomal_S2_B.
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERPTHR12534. PTHR12534. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. SSF52313. 1 hit.
TIGRFAMsTIGR01011. rpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS2_RICTY
AccessionPrimary (citable) accession number: Q68XV5
Entry history
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries