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Reviewed, UniProtKB/Swiss-Prot Q68XT3 (PARB_RICTY)

Last modified November 24, 2009. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Probable chromosome-partitioning protein parB
Gene names
Name: parB
Ordered Locus Names: RT0073
OrganismRickettsia typhi [Complete proteome] [HAMAP]
Taxonomic identifier785 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication By similarity.

Sequence similarities

Belongs to the parB family.

Ontologies

Keywords
   Biological processChromosome partition
   LigandDNA-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processchromosome segregation

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 286286Probable chromosome-partitioning protein parB
PRO_0000291839

Sequences

Sequence LengthMass (Da)Tools
Q68XT3-1 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 95577B48C461AE9B

FASTA28632,962
        10         20         30         40         50         60 
MVKNKGLGRG LSSLLGEEVL PIKSEIVQII NIDKIKPNEN QPRKHFEYNK IKELADSILN 

        70         80         90        100        110        120 
NGLLQPIIVD NNFQIIAGER RWRACKLAQV LEIPVIIKNF DTRESMETAL IENIQRTDLT 

       130        140        150        160        170        180 
VMEEARGFKY LVDNFNYTVE KLAERLGKSR SHIANLLRLN NLPQSIQDKL NENILSMGHA 

       190        200        210        220        230        240 
RCLINHEYAE EIANHIINHD LNVRQTEALV RQWHKNEYKK STNNTNKVGK LCFKDNIIDN 

       250        260        270        280 
DLELLVKALS KKFGIKITID NCNLGGKLMF HYKDLEELDL ILSKLN 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

AE017197 Genomic DNA. Translation: AAU03559.1.
RefSeqYP_067041.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID2959161.
GenomeReviewsGene locus RT0073 in contig AE017197_GR.
KEGGrty:RT0073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ68XT3.
OMAFGHTQEK

Enzyme and pathway databases

BioCycRTYP257363:RT0073-MON.

Family and domain databases

InterProIPR004437. ParB_part.
IPR003115. ParBc.
[Graphical view]
PfamPF02195. ParBc. 1 hit.
[Graphical view]
SMARTSM00470. ParB. 1 hit.
[Graphical view]
TIGRFAMsTIGR00180. parB_part. 1 hit.
ProtoNetSearch...

Entry information

Entry namePARB_RICTY
AccessionPrimary (citable) accession number: Q68XT3
Entry history
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: October 11, 2004
Last modified: November 24, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents