Reviewed, UniProtKB/Swiss-Prot Q68XR7 (RL9_RICTY)

Names and origin

Protein names

Recommended name:
    50S ribosomal protein L9

Gene names

Name:	rplI
Ordered Locus Names:	RT0089

Organism

Rickettsia typhi [Complete proteome] [HAMAP]

Taxonomic identifier

785 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	171 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity.
Sequence similarities	Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 171	171	50S ribosomal protein L9 HAMAP MF_00503		PRO_0000236580

Sequences

	Sequence		Length	Mass (Da)
	Q68XR7-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: F41D5F0907EB5789	FASTA	171	19,351
	10 20 30 40 50 60 MEIILIKPVR KLGKIGDILK VANGFGRNYL LPQKLAIRAT KSNKELIVKQ KHEFEAKDKQ 70 80 90 100 110 120 IRAEVEKINT LIKDQQLVFI RQTSDDCKLF GSVTNKDIAD KLSKNISYNI SHSNVILDKQ 130 140 150 160 170 IKSTGIYTVE IRLHAELTAI VTVIVARSDS EAQDYLREQK TENSADLAES E

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE017197 Genomic DNA. Translation: AAU03575.1.
RefSeq	YP_067057.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2959193.
GenomeReviews	Gene locus RT0089 in contig AE017197_GR.
KEGG	rty:RT0089.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q68XR7.
OMA	MGETVKV
Enzyme and pathway databases
BioCyc	RTYP257363:RT0089-MON.
Family and domain databases
HAMAP	MF_00503. [Tree]
InterPro	IPR000244. Ribosomal_L9. IPR009027. Ribosomal_L9/RNase_H1_N. IPR020594. Ribosomal_L9_bac/chp. IPR020069. Ribosomal_L9_C. IPR020070. Ribosomal_L9_N. [Graphical view]
Gene3D	G3DSA:3.10.430.100. Ribosomal_L9. 1 hit. G3DSA:3.40.5.10. Ribosomal_L9. 1 hit.
PANTHER	PTHR21368. Ribosomal_L9. 1 hit.
Pfam	PF03948. Ribosomal_L9_C. 1 hit. PF01281. Ribosomal_L9_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR00158. L9. 1 hit.
PROSITE	PS00651. RIBOSOMAL_L9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL9_RICTY

Accession

Primary (citable) accession number: Q68XR7

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2006
Last sequence update:	October 11, 2004
Last modified:	November 24, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)