Reviewed, UniProtKB/Swiss-Prot Q68XR5 (RS6_RICTY)

Names and origin

Protein names

Recommended name:
    30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	RT0091

Organism

Rickettsia typhi [Complete proteome] [HAMAP]

Taxonomic identifier

785 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity.
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 121	121	30S ribosomal protein S6 HAMAP MF_00360		PRO_0000176830

Sequences

	Sequence		Length	Mass (Da)
	Q68XR5-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 0C15874F5F5FC3FA	FASTA	121	14,005
	10 20 30 40 50 60 MSFYESVFII RQDVSLNDID KIVDDFTKII KDNDGTIIKK EYWGLRTLAY KIGNNKKGHY 70 80 90 100 110 120 YFLGIDITSN IKEELERKMK LNESIIRFLT IKVDSISSEP SPILKNQSTE NTPVIDVTIN N

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE017197 Genomic DNA. Translation: AAU03577.1.
RefSeq	YP_067059.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2959198.
GenomeReviews	Gene locus RT0091 in contig AE017197_GR.
KEGG	rty:RT0091.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q68XR5.
OMA	MSFYESV
Enzyme and pathway databases
BioCyc	RTYP257363:RT0091-MON.
Family and domain databases
HAMAP	MF_00360. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020814. Ribosomal_S6_bac-like. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_RICTY

Accession

Primary (citable) accession number: Q68XR5

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 15, 2005
Last sequence update:	October 11, 2004
Last modified:	November 24, 2009
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)