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Protein

DNA replication and repair protein RecF

Gene

recF

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi33 – 40ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processDNA damage, DNA repair, DNA replication, SOS response
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRTYP257363:G1G0L-106-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA replication and repair protein RecFUniRule annotation
Gene namesi
Name:recFUniRule annotation
Ordered Locus Names:RT0100
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002361391 – 360DNA replication and repair protein RecFAdd BLAST360

Proteomic databases

PRIDEiQ68XQ6

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0100

Structurei

3D structure databases

ProteinModelPortaliQ68XQ6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RecF family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C3X Bacteria
COG1195 LUCA
HOGENOMiHOG000269558
KOiK03629
OMAiGQQKSFL
OrthoDBiPOG091H00U7

Family and domain databases

HAMAPiMF_00365 RecF, 1 hit
InterProiView protein in InterPro
IPR001238 DNA-binding_RecF
IPR018078 DNA-binding_RecF_CS
IPR027417 P-loop_NTPase
IPR003395 RecF/RecN/SMC_N
PANTHERiPTHR32182:SF0 PTHR32182:SF0, 1 hit
PfamiView protein in Pfam
PF02463 SMC_N, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00611 recf, 1 hit
PROSITEiView protein in PROSITE
PS00617 RECF_1, 1 hit
PS00618 RECF_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q68XQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNIFLHSLN LENYRNFKNL ELKIDNIPII LTGENGSGKT NILEAISLFY
60 70 80 90 100
PGRGLRSSKL TDICKTSEDY CRVKALLQSK LGIADFSTHI KRNSNRRITE
110 120 130 140 150
YNASKIANNE LSKFTSMVWL TPQMEGIFTS SSTDRRKFLD RIVYNFDTKH
160 170 180 190 200
AELLNKYEYY MHERNKILAE DIRDNNWLKI IEENMANISN IIANNRLKTI
210 220 230 240 250
RFMQQAIDEI ENEFPKADLS IDGIIEQKIL NVEEDIVSFI ITELYQTRSK
260 270 280 290 300
DKLLGRTSFG IHKSDFLVKH QKKNILAKFC STGEQKAILI AIILAEMNST
310 320 330 340 350
IKLTKITPIL LLDEIFVHLD DKRRQYLMDF FTALNIQLWV TATNLDGIEN
360
FANKAQLIKL
Length:360
Mass (Da):41,725
Last modified:October 11, 2004 - v1
Checksum:i6D8BA92151E64935
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA Translation: AAU03586.1
RefSeqiWP_011190573.1, NC_006142.1

Genome annotation databases

EnsemblBacteriaiAAU03586; AAU03586; RT0100
KEGGirty:RT0100

Similar proteinsi

Entry informationi

Entry nameiRECF_RICTY
AccessioniPrimary (citable) accession number: Q68XQ6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: October 11, 2004
Last modified: May 23, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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