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Protein

UPF0176 protein RT0114

Gene

RT0114

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-122-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein RT0114UniRule annotation
Gene namesi
Ordered Locus Names:RT0114
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 247247UPF0176 protein RT0114PRO_0000161506Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0114.

Structurei

3D structure databases

ProteinModelPortaliQ68XP2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini124 – 21895RhodaneseUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG1054.
HOGENOMiHOG000034808.
KOiK07146.
OMAiLIGKRKY.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68XP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNERIAILSA YSFVNIIEPA NLIPKFLLIG KKKYIRGTIL LANEGFNCSF
60 70 80 90 100
SGSYENVNLV LKQLIELTGS KDVNVKINYS SVHPFQKLKV RLKKEIIAMN
110 120 130 140 150
VKDLNIEVFK GDYIEPKDWD EFITKQNVIV IDTRNEYEID IGTFKSAINP
160 170 180 190 200
RTETFKQFPA WVQQNQALLQ GKKIAMFCTG GIRCEKSTSL LKSIGYNEVY
210 220 230 240
HLKGGILQYL EDTHNKNNLW QGKCFVFDDR RAIMDDLSPA EGYWLHR
Length:247
Mass (Da):28,452
Last modified:October 11, 2004 - v1
Checksum:iC38BD4D764C998B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03600.1.
RefSeqiWP_011190587.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03600; AAU03600; RT0114.
KEGGirty:RT0114.
PATRICi17909400. VBIRicTyp34752_0121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03600.1.
RefSeqiWP_011190587.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68XP2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0114.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU03600; AAU03600; RT0114.
KEGGirty:RT0114.
PATRICi17909400. VBIRicTyp34752_0121.

Phylogenomic databases

eggNOGiCOG1054.
HOGENOMiHOG000034808.
KOiK07146.
OMAiLIGKRKY.
OrthoDBiEOG6ND0G7.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-122-MONOMER.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiY114_RICTY
AccessioniPrimary (citable) accession number: Q68XP2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: October 11, 2004
Last modified: July 22, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.