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Q68XN0 (RL10_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Gene names
Name:rplJ
Ordered Locus Names:RT0127
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length169 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity. HAMAP-Rule MF_00362

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

translation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 16916950S ribosomal protein L10 HAMAP-Rule MF_00362
PRO_0000154699

Sequences

Sequence LengthMass (Da)Tools
Q68XN0 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 3EFFC5CCED03C383

FASTA16918,248
        10         20         30         40         50         60 
MLRSEKPVAV EDIVNIYKES PSVIITHYHG LTVSQVSSLR EALKSKEVGF KVVKNTLAKI 

        70         80         90        100        110        120 
AAKHTGLDSI TDLFAGPSAI VYSKEPVEMA RLVVNFANSN DNLKIIGGIV DNHILDTYAI 

       130        140        150        160 
KELAKLPSLH ELRGKIVGLL QAPATKVVGV LQATSSSIAR VIHAHAIKH 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU03612.1.
RefSeqYP_067094.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68XN0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0127.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU03612; AAU03612; RT0127.
GeneID2958610.
KEGGrty:RT0127.
PATRIC17909426. VBIRicTyp34752_0133.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0244.
HOGENOMHOG000004852.
KOK02864.
OMASGPTCVL.
OrthoDBEOG6DNTDR.
ProtClustDBPRK00099.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-135-MONOMER.

Family and domain databases

HAMAPMF_00362. Ribosomal_L10.
InterProIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PANTHERPTHR11560:SF8. PTHR11560:SF8. 1 hit.
PfamPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL10_RICTY
AccessionPrimary (citable) accession number: Q68XN0
Entry history
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries