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Q68XN0

- RL10_RICTY

UniProt

Q68XN0 - RL10_RICTY

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-135-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10UniRule annotation
    Gene namesi
    Name:rplJUniRule annotation
    Ordered Locus Names:RT0127
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 16916950S ribosomal protein L10PRO_0000154699Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0127.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68XN0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000004852.
    KOiK02864.
    OMAiSGPTCVL.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]
    PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68XN0-1 [UniParc]FASTAAdd to Basket

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    MLRSEKPVAV EDIVNIYKES PSVIITHYHG LTVSQVSSLR EALKSKEVGF    50
    KVVKNTLAKI AAKHTGLDSI TDLFAGPSAI VYSKEPVEMA RLVVNFANSN 100
    DNLKIIGGIV DNHILDTYAI KELAKLPSLH ELRGKIVGLL QAPATKVVGV 150
    LQATSSSIAR VIHAHAIKH 169
    Length:169
    Mass (Da):18,248
    Last modified:October 11, 2004 - v1
    Checksum:i3EFFC5CCED03C383
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU03612.1.
    RefSeqiYP_067094.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU03612; AAU03612; RT0127.
    GeneIDi2958610.
    KEGGirty:RT0127.
    PATRICi17909426. VBIRicTyp34752_0133.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU03612.1 .
    RefSeqi YP_067094.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68XN0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0127.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU03612 ; AAU03612 ; RT0127 .
    GeneIDi 2958610.
    KEGGi rty:RT0127.
    PATRICi 17909426. VBIRicTyp34752_0133.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000004852.
    KOi K02864.
    OMAi SGPTCVL.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-135-MONOMER.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    PROSITEi PS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRL10_RICTY
    AccessioniPrimary (citable) accession number: Q68XN0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 15, 2005
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3