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Protein

30S ribosomal protein S9

Gene

rpsI

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-238-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S9UniRule annotation
Gene namesi
Name:rpsIUniRule annotation
Ordered Locus Names:RT0226
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 16116130S ribosomal protein S9PRO_0000278004Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0226.

Structurei

3D structure databases

ProteinModelPortaliQ68XD4.
SMRiQ68XD4. Positions 35-161.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S9P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0103.
HOGENOMiHOG000019802.
KOiK02996.
OMAiIKQGAAR.
OrthoDBiEOG6MWNH0.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
HAMAPiMF_00532_B. Ribosomal_S9_B.
InterProiIPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR023035. Ribosomal_S9_bac/plastid.
IPR020574. Ribosomal_S9_CS.
[Graphical view]
PANTHERiPTHR21569. PTHR21569. 1 hit.
PfamiPF00380. Ribosomal_S9. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiPS00360. RIBOSOMAL_S9. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68XD4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTELKIKTEK VVKQLTKESL KPVLKVPKAK IDNASQFYAT GKRKNAIARV
60 70 80 90 100
WLKVGKGKIV VNNKILNQYF PSETYIKTIL QPFLLTKTID QYDVICTVRG
110 120 130 140 150
GGISGQKGAI LHGISKALDK SAPCFHAILR KGGLLTRDSR VVERKKYGQR
160
KARKKTQFSK R
Length:161
Mass (Da):18,142
Last modified:October 11, 2004 - v1
Checksum:iA7E86D0F9A8B5507
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03708.1.
RefSeqiWP_011190694.1. NC_006142.1.
YP_067190.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03708; AAU03708; RT0226.
KEGGirty:RT0226.
PATRICi17909634. VBIRicTyp34752_0234.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03708.1.
RefSeqiWP_011190694.1. NC_006142.1.
YP_067190.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68XD4.
SMRiQ68XD4. Positions 35-161.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0226.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU03708; AAU03708; RT0226.
KEGGirty:RT0226.
PATRICi17909634. VBIRicTyp34752_0234.

Phylogenomic databases

eggNOGiCOG0103.
HOGENOMiHOG000019802.
KOiK02996.
OMAiIKQGAAR.
OrthoDBiEOG6MWNH0.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-238-MONOMER.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
HAMAPiMF_00532_B. Ribosomal_S9_B.
InterProiIPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR023035. Ribosomal_S9_bac/plastid.
IPR020574. Ribosomal_S9_CS.
[Graphical view]
PANTHERiPTHR21569. PTHR21569. 1 hit.
PfamiPF00380. Ribosomal_S9. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiPS00360. RIBOSOMAL_S9. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiRS9_RICTY
AccessioniPrimary (citable) accession number: Q68XD4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: October 11, 2004
Last modified: May 27, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.