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Protein

Putative membrane protein insertion efficiency factor

Gene

RT0341

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Could be involved in insertion of integral membrane proteins into the membrane.UniRule annotation

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-358-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative membrane protein insertion efficiency factorUniRule annotation
Gene namesi
Ordered Locus Names:RT0341
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

Subcellular locationi

  1. Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation

GO - Cellular componenti

  1. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8282Putative membrane protein insertion efficiency factorPRO_0000253160Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0341.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0161 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0759.
HOGENOMiHOG000231600.
KOiK08998.
OMAiYDPVPAV.
OrthoDBiEOG61ZTN6.

Family and domain databases

HAMAPiMF_00386. UPF0161_YidD.
InterProiIPR002696. Membr_insert_effic_factor.
[Graphical view]
PfamiPF01809. Haemolytic. 1 hit.
[Graphical view]
ProDomiPD004225. DUF37. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00278. TIGR00278. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68X21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKILLLTIT FYKYFISPLL GNNCIFSPTC SEYAQEAIIT HGIIKGLWLT
60 70 80
FRRIIKCQPF CIGGYDNVPT SIKNSKQPTK KI
Length:82
Mass (Da):9,345
Last modified:October 11, 2004 - v1
Checksum:iE838C1496F551194
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03821.1.
RefSeqiYP_067303.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03821; AAU03821; RT0341.
KEGGirty:RT0341.
PATRICi17909886. VBIRicTyp34752_0358.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03821.1.
RefSeqiYP_067303.1. NC_006142.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0341.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU03821; AAU03821; RT0341.
KEGGirty:RT0341.
PATRICi17909886. VBIRicTyp34752_0358.

Phylogenomic databases

eggNOGiCOG0759.
HOGENOMiHOG000231600.
KOiK08998.
OMAiYDPVPAV.
OrthoDBiEOG61ZTN6.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-358-MONOMER.

Family and domain databases

HAMAPiMF_00386. UPF0161_YidD.
InterProiIPR002696. Membr_insert_effic_factor.
[Graphical view]
PfamiPF01809. Haemolytic. 1 hit.
[Graphical view]
ProDomiPD004225. DUF37. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00278. TIGR00278. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiYIDD_RICTY
AccessioniPrimary (citable) accession number: Q68X21
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: October 11, 2004
Last modified: April 29, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.