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Q68X15 (Y347_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative polysaccharide polymerase RT0347
Gene names
Ordered Locus Names:RT0347
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the O-antigen polymerase family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 405405Putative polysaccharide polymerase RT0347
PRO_0000280993

Regions

Transmembrane23 – 4321Helical; Potential
Transmembrane77 – 9721Helical; Potential
Transmembrane120 – 14021Helical; Potential
Transmembrane156 – 17823Helical; Potential
Transmembrane201 – 22121Helical; Potential
Transmembrane227 – 24721Helical; Potential
Transmembrane270 – 29021Helical; Potential
Transmembrane322 – 34221Helical; Potential
Transmembrane353 – 37523Helical; Potential
Transmembrane377 – 39721Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q68X15 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: D0AF1D1AA79DE853

FASTA40546,583
        10         20         30         40         50         60 
MQYLILSLIF LIPSLGMLTG LSIAATVLFF LLIIVITELI SFIRKQEFSK KFLIKLYPRF 

        70         80         90        100        110        120 
GFDDIFCVKN RIKTELLFIA WCFISCLFTI HPINSLVTFT KVFALLFLRF VNNVVTFQNI 

       130        140        150        160        170        180 
LYLKNSLILG IITAILLFFI EYSSHGFLTR MFKTHFGLYM LDRGCALLSI TTWVVIIILF 

       190        200        210        220        230        240 
SNGKNINAFI LYIVVLYLLS ISDSLASFVG FSIGGIIFIL ARLIKKIFFK LITISLITGS 

       250        260        270        280        290        300 
LLFPIIAKQI DPHNLSEKYL ATKPSAAHRL FIWHFVANKI IIKPILGYGF ASSKYIKTSD 

       310        320        330        340        350        360 
NEMIDYRGEK LHPLPLHPHN NILQITLELG ILGLALFLCL VYKYLKEIDN IKISNFRAAS 

       370        380        390        400 
YSCFINYYII GMISYNIWQT WWILSGIWIL VLMKLLVKPD IIIDN 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU03827.1.
RefSeqYP_067309.1. NC_006142.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0347.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU03827; AAU03827; RT0347.
GeneID2958581.
KEGGrty:RT0347.
PATRIC17909898. VBIRicTyp34752_0364.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3307.
HOGENOMHOG000010752.
OMAVWQSSNN.
OrthoDBEOG679TJ5.
ProtClustDBCLSK870880.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-364-MONOMER.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameY347_RICTY
AccessionPrimary (citable) accession number: Q68X15
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names