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Protein

Tyrosine recombinase XerC

Gene

xerD

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei136UniRule annotation1
Active sitei167UniRule annotation1
Active sitei242UniRule annotation1
Active sitei245UniRule annotation1
Active sitei268UniRule annotation1
Active sitei277O-(3'-phospho-DNA)-tyrosine intermediateUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation
Biological processCell cycle, Cell divisionUniRule annotationSAAS annotation, Chromosome partitionUniRule annotationSAAS annotation, DNA integrationUniRule annotationSAAS annotation, DNA recombinationUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Tyrosine recombinase XerCUniRule annotation
Gene namesi
Name:xerDImported
Synonyms:xerCUniRule annotation
Ordered Locus Names:RT0350Imported
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)Imported
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000000604 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi257363.RT0350.

Structurei

3D structure databases

ProteinModelPortaliQ68X13.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 76Integrase_SAM-like_NInterPro annotationAdd BLAST75
Domaini100 – 281Phage_integraseInterPro annotationAdd BLAST182

Sequence similaritiesi

Belongs to the 'phage' integrase family. XerC subfamily.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105C13. Bacteria.
COG4974. LUCA.
HOGENOMiHOG000045296.
KOiK04763.
OMAiTRQAFWY.
OrthoDBiPOG091H00PN.

Family and domain databases

Gene3Di1.10.150.130. 1 hit.
1.10.443.10. 1 hit.
HAMAPiMF_01808. Recomb_XerC_XerD. 1 hit.
InterProiView protein in InterPro
IPR011010. DNA_brk_join_enz.
IPR013762. Integrase-like_cat_sf.
IPR002104. Integrase_catalytic.
IPR010998. Integrase_recombinase_N.
IPR004107. Integrase_SAM-like_N.
IPR023009. Tyrosine_recombinase_XerC/XerD.
PfamiView protein in Pfam
PF02899. Phage_int_SAM_1. 1 hit.
PF00589. Phage_integrase. 1 hit.
SUPFAMiSSF56349. SSF56349. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68X13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLAERALSK NSILSYKRDL LDFHNYLTKQ KISELNITTR NIRKWIEYLA
60 70 80 90 100
SNNLHARSIN RKISTIKSYY TFLISENHTA FNPVLNVDLP KYQNKLPVIL
110 120 130 140 150
SIDQIKLILE YCSKDHTPEG IRLNAMIHLL YASGLRVSEL VSLKLADILT
160 170 180 190 200
NNTSKGIVRK IFSVLGKGNK ERVIVINDQA VLSITKYLKI RDIFVNKAKS
210 220 230 240 250
KNLIYLFPSS AVAGYMTRQN FAILLKSVAL DIGLNPKNVS PHILRHSFAS
260 270 280 290
HLLEGGADLR VIQELLGHAD ISTTQIYTHL HTNHLKQALL HHPLNKN
Length:297
Mass (Da):33,762
Last modified:October 11, 2004 - v1
Checksum:i6EA832DEAEBCBEB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU03829.1.

Genome annotation databases

EnsemblBacteriaiAAU03829; AAU03829; RT0350.
KEGGirty:RT0350.

Similar proteinsi

Entry informationi

Entry nameiQ68X13_RICTY
AccessioniPrimary (citable) accession number: Q68X13
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 22, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported