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Q68WU3

- RBFA_RICTY

UniProt

Q68WU3 - RBFA_RICTY

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Protein

Ribosome-binding factor A

Gene
rbfA, RT0422
Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity.UniRule annotation

GO - Biological processi

  1. rRNA processing Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

rRNA processing

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-444-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome-binding factor A
Gene namesi
Name:rbfA
Ordered Locus Names:RT0422
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 127127Ribosome-binding factor AUniRule annotationPRO_0000102723Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0422.

Structurei

3D structure databases

ProteinModelPortaliQ68WU3.

Family & Domainsi

Sequence similaritiesi

Belongs to the RbfA family.

Phylogenomic databases

eggNOGiCOG0858.
HOGENOMiHOG000272967.
KOiK02834.
OMAiTNKINMK.
OrthoDBiEOG68Q0RP.

Family and domain databases

Gene3Di3.30.300.20. 1 hit.
HAMAPiMF_00003. RbfA.
InterProiIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view]
PfamiPF02033. RBFA. 1 hit.
[Graphical view]
ProDomiPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF89919. SSF89919. 1 hit.
TIGRFAMsiTIGR00082. rbfA. 1 hit.
PROSITEiPS01319. RBFA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68WU3-1 [UniParc]FASTAAdd to Basket

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MKKLTKTNSH RQQKLASIIN EVLIEILKRG KMLDRRLFDC PLTITKIVVT    50
ADLKIANCYF FPFNTKLTFN DIMDALNNSK HAIRNFITNK INMKFSPEIR 100
FHYDYGFDNA IKIEKLLKSS SLKDKTN 127
Length:127
Mass (Da):14,857
Last modified:October 11, 2004 - v1
Checksum:iB755AD2DF984850C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU03899.1.
RefSeqiYP_067381.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU03899; AAU03899; RT0422.
GeneIDi2958772.
KEGGirty:RT0422.
PATRICi17910076. VBIRicTyp34752_0450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU03899.1 .
RefSeqi YP_067381.1. NC_006142.1.

3D structure databases

ProteinModelPortali Q68WU3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 257363.RT0422.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU03899 ; AAU03899 ; RT0422 .
GeneIDi 2958772.
KEGGi rty:RT0422.
PATRICi 17910076. VBIRicTyp34752_0450.

Phylogenomic databases

eggNOGi COG0858.
HOGENOMi HOG000272967.
KOi K02834.
OMAi TNKINMK.
OrthoDBi EOG68Q0RP.

Enzyme and pathway databases

BioCyci RTYP257363:GJEQ-444-MONOMER.

Family and domain databases

Gene3Di 3.30.300.20. 1 hit.
HAMAPi MF_00003. RbfA.
InterProi IPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view ]
Pfami PF02033. RBFA. 1 hit.
[Graphical view ]
ProDomi PD007327. Rib_bd_factA. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF89919. SSF89919. 1 hit.
TIGRFAMsi TIGR00082. rbfA. 1 hit.
PROSITEi PS01319. RBFA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiRBFA_RICTY
AccessioniPrimary (citable) accession number: Q68WU3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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