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Q68WF1

- SCO22_RICTY

UniProt

Q68WF1 - SCO22_RICTY

Protein

SCO2-like protein RT0576

Gene

RT0576

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 2 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi80 – 801CopperBy similarity
    Metal bindingi84 – 841CopperBy similarity
    Metal bindingi170 – 1701CopperBy similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    Copper, Metal-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-605-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    SCO2-like protein RT0576
    Gene namesi
    Ordered Locus Names:RT0576
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 203203SCO2-like protein RT0576PRO_0000280798Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi257363.RT0576.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68WF1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini42 – 203162ThioredoxinPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the SCO1/2 family.Curated
    Contains 1 thioredoxin domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG1999.
    HOGENOMiHOG000258139.
    KOiK07152.
    OMAiTSYSMDH.
    OrthoDBiEOG6S26DB.

    Family and domain databases

    Gene3Di3.40.30.10. 1 hit.
    InterProiIPR003782. SCO1/SenC.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view]
    PANTHERiPTHR12151. PTHR12151. 1 hit.
    PfamiPF02630. SCO1-SenC. 1 hit.
    [Graphical view]
    SUPFAMiSSF52833. SSF52833. 1 hit.
    PROSITEiPS51352. THIOREDOXIN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68WF1-1 [UniParc]FASTAAdd to Basket

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    MQSNIMKIII IVSLLIVVGT LYVLLSLSTP KKPLAGQVNI YKDNIKIGEA    50
    FELIDQNGEI FNSNKLRGHL SLIYFGFTSC PDICPTFLNK MTNIVEILHQ 100
    NQIDIIPIFI TIDPKRDTPE VLKEYIKNFH PKFICLTGNE HQIKDVTDKF 150
    KILYARVNGY DDDQNYMIDH SSFTYLIDKN GKYIKHFYLD ISAKEIMEFL 200
    RNE 203
    Length:203
    Mass (Da):23,540
    Last modified:March 20, 2007 - v2
    Checksum:i2E05822535359599
    GO

    Sequence cautioni

    The sequence AAU04041.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04041.1. Different initiation.
    RefSeqiYP_067523.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04041; AAU04041; RT0576.
    GeneIDi2959305.
    KEGGirty:RT0576.
    PATRICi17910388. VBIRicTyp34752_0595.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04041.1 . Different initiation.
    RefSeqi YP_067523.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68WF1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0576.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04041 ; AAU04041 ; RT0576 .
    GeneIDi 2959305.
    KEGGi rty:RT0576.
    PATRICi 17910388. VBIRicTyp34752_0595.

    Phylogenomic databases

    eggNOGi COG1999.
    HOGENOMi HOG000258139.
    KOi K07152.
    OMAi TSYSMDH.
    OrthoDBi EOG6S26DB.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-605-MONOMER.

    Family and domain databases

    Gene3Di 3.40.30.10. 1 hit.
    InterProi IPR003782. SCO1/SenC.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view ]
    PANTHERi PTHR12151. PTHR12151. 1 hit.
    Pfami PF02630. SCO1-SenC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52833. SSF52833. 1 hit.
    PROSITEi PS51352. THIOREDOXIN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiSCO22_RICTY
    AccessioniPrimary (citable) accession number: Q68WF1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 55 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3