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Q68WF1 (SCO22_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
SCO2-like protein RT0576
Gene names
Ordered Locus Names:RT0576
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the SCO1/2 family.

Contains 1 thioredoxin domain.

Sequence caution

The sequence AAU04041.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandCopper
Metal-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 203203SCO2-like protein RT0576
PRO_0000280798

Regions

Domain42 – 203162Thioredoxin

Sites

Metal binding801Copper By similarity
Metal binding841Copper By similarity
Metal binding1701Copper By similarity

Sequences

Sequence LengthMass (Da)Tools
Q68WF1 [UniParc].

Last modified March 20, 2007. Version 2.
Checksum: 2E05822535359599

FASTA20323,540
        10         20         30         40         50         60 
MQSNIMKIII IVSLLIVVGT LYVLLSLSTP KKPLAGQVNI YKDNIKIGEA FELIDQNGEI 

        70         80         90        100        110        120 
FNSNKLRGHL SLIYFGFTSC PDICPTFLNK MTNIVEILHQ NQIDIIPIFI TIDPKRDTPE 

       130        140        150        160        170        180 
VLKEYIKNFH PKFICLTGNE HQIKDVTDKF KILYARVNGY DDDQNYMIDH SSFTYLIDKN 

       190        200 
GKYIKHFYLD ISAKEIMEFL RNE 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU04041.1. Different initiation.
RefSeqYP_067523.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68WF1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0576.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU04041; AAU04041; RT0576.
GeneID2959305.
KEGGrty:RT0576.
PATRIC17910388. VBIRicTyp34752_0595.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1999.
HOGENOMHOG000258139.
KOK07152.
OMAYYKKVEG.
OrthoDBEOG6S26DB.
ProtClustDBCLSK871001.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-605-MONOMER.

Family and domain databases

Gene3D3.40.30.10. 1 hit.
InterProIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERPTHR12151. PTHR12151. 1 hit.
PfamPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMSSF52833. SSF52833. 1 hit.
PROSITEPS51352. THIOREDOXIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSCO22_RICTY
AccessionPrimary (citable) accession number: Q68WF1
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: March 20, 2007
Last modified: November 13, 2013
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names