Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

SCO2-like protein RT0576

Gene

RT0576

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi80 – 801CopperBy similarity
Metal bindingi84 – 841CopperBy similarity
Metal bindingi170 – 1701CopperBy similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Copper, Metal-binding

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-605-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
SCO2-like protein RT0576
Gene namesi
Ordered Locus Names:RT0576
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 203203SCO2-like protein RT0576PRO_0000280798Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0576.

Structurei

3D structure databases

ProteinModelPortaliQ68WF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 203162ThioredoxinPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the SCO1/2 family.Curated
Contains 1 thioredoxin domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1999.
HOGENOMiHOG000258139.
KOiK07152.
OMAiEYAHYFH.
OrthoDBiEOG6S26DB.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERiPTHR12151. PTHR12151. 1 hit.
PfamiPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
PROSITEiPS51352. THIOREDOXIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68WF1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSNIMKIII IVSLLIVVGT LYVLLSLSTP KKPLAGQVNI YKDNIKIGEA
60 70 80 90 100
FELIDQNGEI FNSNKLRGHL SLIYFGFTSC PDICPTFLNK MTNIVEILHQ
110 120 130 140 150
NQIDIIPIFI TIDPKRDTPE VLKEYIKNFH PKFICLTGNE HQIKDVTDKF
160 170 180 190 200
KILYARVNGY DDDQNYMIDH SSFTYLIDKN GKYIKHFYLD ISAKEIMEFL

RNE
Length:203
Mass (Da):23,540
Last modified:March 20, 2007 - v2
Checksum:i2E05822535359599
GO

Sequence cautioni

The sequence AAU04041.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04041.1. Different initiation.
RefSeqiYP_067523.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04041; AAU04041; RT0576.
GeneIDi2959305.
KEGGirty:RT0576.
PATRICi17910388. VBIRicTyp34752_0595.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04041.1. Different initiation.
RefSeqiYP_067523.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68WF1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0576.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU04041; AAU04041; RT0576.
GeneIDi2959305.
KEGGirty:RT0576.
PATRICi17910388. VBIRicTyp34752_0595.

Phylogenomic databases

eggNOGiCOG1999.
HOGENOMiHOG000258139.
KOiK07152.
OMAiEYAHYFH.
OrthoDBiEOG6S26DB.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-605-MONOMER.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERiPTHR12151. PTHR12151. 1 hit.
PfamiPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
PROSITEiPS51352. THIOREDOXIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiSCO22_RICTY
AccessioniPrimary (citable) accession number: Q68WF1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: March 20, 2007
Last modified: January 7, 2015
This is version 56 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.