Q68WF1 (SCO22_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
SCO2-like protein RT0576

Gene names

Ordered Locus Names:

RT0576

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group › Rickettsia typhi

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities	Belongs to the SCO1/2 family. Contains 1 thioredoxin domain.
Sequence caution	The sequence AAU04041.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Ligand	Copper Metal-binding
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 203	203	SCO2-like protein RT0576		PRO_0000280798
Regions
	Domain	42 – 203	162	Thioredoxin
Sites
	Metal binding	80	1	Copper By similarity
	Metal binding	84	1	Copper By similarity
	Metal binding	170	1	Copper By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q68WF1 [UniParc]. Last modified March 20, 2007. Version 2. Checksum: 2E05822535359599	FASTA	203	23,540
	10 20 30 40 50 60 MQSNIMKIII IVSLLIVVGT LYVLLSLSTP KKPLAGQVNI YKDNIKIGEA FELIDQNGEI 70 80 90 100 110 120 FNSNKLRGHL SLIYFGFTSC PDICPTFLNK MTNIVEILHQ NQIDIIPIFI TIDPKRDTPE 130 140 150 160 170 180 VLKEYIKNFH PKFICLTGNE HQIKDVTDKF KILYARVNGY DDDQNYMIDH SSFTYLIDKN 190 200 GKYIKHFYLD ISAKEIMEFL RNE

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017197 Genomic DNA. Translation: AAU04041.1. Different initiation.
RefSeq	YP_067523.1. NC_006142.1.
3D structure databases
HSSP	HSSP built from PDB template 2B7K based on UniProtKB P23833.
ProteinModelPortal	Q68WF1.
ModBase	Search...
Protein-protein interaction databases
STRING	257363.RT0576.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU04041; AAU04041; RT0576.
GeneID	2959305.
KEGG	rty:RT0576.
PATRIC	17910388. VBIRicTyp34752_0595.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1999.
HOGENOM	HOG000258139.
KO	K07152.
OMA	TPTSYSM.
ProtClustDB	CLSK871001.
Enzyme and pathway databases
BioCyc	RTYP257363:GJEQ-605-MONOMER.
Family and domain databases
Gene3D	3.40.30.10. 1 hit.
InterPro	IPR003782. SCO1/SenC. IPR012336. Thioredoxin-like_fold. [Graphical view]
PANTHER	PTHR12151. PTHR12151. 1 hit.
Pfam	PF02630. SCO1-SenC. 1 hit. [Graphical view]
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
PROSITE	PS51352. THIOREDOXIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SCO22_RICTY

Accession

Primary (citable) accession number: Q68WF1

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	May 1, 2013
This is version 50 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program