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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21UniRule annotation
Gene namesi
Name:rpsUUniRule annotation
Ordered Locus Names:RT0604
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001783691 – 6630S ribosomal protein S21Add BLAST66

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0604.

Structurei

3D structure databases

ProteinModelPortaliQ68WC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiHRKERAM.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68WC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILVNVHAGN CDNTLKNFKK KLQRELYFRK MKEQRYYETP SAKRVRKAQE
60
AARRIRKFAR KKMYEE
Length:66
Mass (Da):8,139
Last modified:October 11, 2004 - v1
Checksum:i0E6024D21EB4B4B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04068.1.
RefSeqiWP_004599167.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04068; AAU04068; RT0604.
KEGGirty:RT0604.
PATRICi17910448. VBIRicTyp34752_0624.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04068.1.
RefSeqiWP_004599167.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68WC4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0604.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU04068; AAU04068; RT0604.
KEGGirty:RT0604.
PATRICi17910448. VBIRicTyp34752_0624.

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiHRKERAM.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS21_RICTY
AccessioniPrimary (citable) accession number: Q68WC4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: October 11, 2004
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.