Q68WA1 (RS11_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S11

Gene names

Name:	rpsK
Ordered Locus Names:	RT0628

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group › Rickettsia typhi

Protein attributes

Sequence length	127 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome By similarity. HAMAP-Rule MF_01310
Subunit structure	Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3 By similarity.
Sequence similarities	Belongs to the ribosomal protein S11P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 127	127	30S ribosomal protein S11 HAMAP-Rule MF_01310		PRO_0000277893

Sequences

	Sequence		Length	Mass (Da)
	Q68WA1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: BED96964C891616C	FASTA	127	13,583
	10 20 30 40 50 60 MNQTIKVKKK KKTITLGVVH IRASFNNTIV TFTDIQGNTI SSASAGGNGF KGARKATPYA 70 80 90 100 110 120 AQVTIDKASE KAKECGLKTI SIRIGGPGAQ RESAMRALFG QNFVVTSILD VSSIAHNGVR PPKRRRV

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017197 Genomic DNA. Translation: AAU04091.1.
RefSeq	YP_067573.1. NC_006142.1.
3D structure databases
ProteinModelPortal	Q68WA1.
SMR	Q68WA1. Positions 11-127.
ModBase	Search...
Protein-protein interaction databases
STRING	257363.RT0628.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU04091; AAU04091; RT0628.
GeneID	2958700.
KEGG	rty:RT0628.
PATRIC	17910498. VBIRicTyp34752_0648.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0100.
HOGENOM	HOG000111597.
KO	K02948.
OMA	PHNGCRR.
ProtClustDB	PRK05309.
Enzyme and pathway databases
BioCyc	RTYP257363:GJEQ-659-MONOMER.
Family and domain databases
Gene3D	3.30.420.80. 1 hit.
HAMAP	MF_01310. Ribosomal_S11.
InterPro	IPR001971. Ribosomal_S11. IPR019981. Ribosomal_S11_bac-type. IPR018102. Ribosomal_S11_CS. [Graphical view]
PANTHER	PTHR11759. PTHR11759. 1 hit.
Pfam	PF00411. Ribosomal_S11. 1 hit. [Graphical view]
PIRSF	PIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMs	TIGR03632. bact_S11. 1 hit.
PROSITE	PS00054. RIBOSOMAL_S11. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS11_RICTY

Accession

Primary (citable) accession number: Q68WA1

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 20, 2007
Last sequence update:	October 11, 2004
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program