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Q68WA1 (RS11_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S11
Gene names
Name:rpsK
Ordered Locus Names:RT0628
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length127 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome By similarity. HAMAP-Rule MF_01310

Subunit structure

Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3 By similarity.

Sequence similarities

Belongs to the ribosomal protein S11P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12712730S ribosomal protein S11 HAMAP-Rule MF_01310
PRO_0000277893

Sequences

Sequence LengthMass (Da)Tools
Q68WA1 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: BED96964C891616C

FASTA12713,583
        10         20         30         40         50         60 
MNQTIKVKKK KKTITLGVVH IRASFNNTIV TFTDIQGNTI SSASAGGNGF KGARKATPYA 

        70         80         90        100        110        120 
AQVTIDKASE KAKECGLKTI SIRIGGPGAQ RESAMRALFG QNFVVTSILD VSSIAHNGVR 


PPKRRRV 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU04091.1.
RefSeqYP_067573.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68WA1.
SMRQ68WA1. Positions 11-127.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0628.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU04091; AAU04091; RT0628.
GeneID2958700.
KEGGrty:RT0628.
PATRIC17910498. VBIRicTyp34752_0648.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0100.
HOGENOMHOG000111597.
KOK02948.
OMAVAHIQST.
OrthoDBEOG6ZSPF3.
ProtClustDBPRK05309.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-659-MONOMER.

Family and domain databases

Gene3D3.30.420.80. 1 hit.
HAMAPMF_01310. Ribosomal_S11.
InterProIPR001971. Ribosomal_S11.
IPR019981. Ribosomal_S11_bac-type.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERPTHR11759. PTHR11759. 1 hit.
PfamPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsTIGR03632. bact_S11. 1 hit.
PROSITEPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS11_RICTY
AccessionPrimary (citable) accession number: Q68WA1
Entry history
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries