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Q68WA1

- RS11_RICTY

UniProt

Q68WA1 - RS11_RICTY

Protein

30S ribosomal protein S11

Gene

rpsK

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-659-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S11UniRule annotation
    Gene namesi
    Name:rpsKUniRule annotation
    Ordered Locus Names:RT0628
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12712730S ribosomal protein S11PRO_0000277893Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0628.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68WA1.
    SMRiQ68WA1. Positions 11-127.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S11P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0100.
    HOGENOMiHOG000111597.
    KOiK02948.
    OMAiRTVGIFV.
    OrthoDBiEOG6ZSPF3.

    Family and domain databases

    Gene3Di3.30.420.80. 1 hit.
    HAMAPiMF_01310. Ribosomal_S11.
    InterProiIPR001971. Ribosomal_S11.
    IPR019981. Ribosomal_S11_bac-type.
    IPR018102. Ribosomal_S11_CS.
    [Graphical view]
    PANTHERiPTHR11759. PTHR11759. 1 hit.
    PfamiPF00411. Ribosomal_S11. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
    TIGRFAMsiTIGR03632. bact_S11. 1 hit.
    PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68WA1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNQTIKVKKK KKTITLGVVH IRASFNNTIV TFTDIQGNTI SSASAGGNGF    50
    KGARKATPYA AQVTIDKASE KAKECGLKTI SIRIGGPGAQ RESAMRALFG 100
    QNFVVTSILD VSSIAHNGVR PPKRRRV 127
    Length:127
    Mass (Da):13,583
    Last modified:October 11, 2004 - v1
    Checksum:iBED96964C891616C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04091.1.
    RefSeqiYP_067573.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04091; AAU04091; RT0628.
    GeneIDi2958700.
    KEGGirty:RT0628.
    PATRICi17910498. VBIRicTyp34752_0648.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04091.1 .
    RefSeqi YP_067573.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68WA1.
    SMRi Q68WA1. Positions 11-127.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0628.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04091 ; AAU04091 ; RT0628 .
    GeneIDi 2958700.
    KEGGi rty:RT0628.
    PATRICi 17910498. VBIRicTyp34752_0648.

    Phylogenomic databases

    eggNOGi COG0100.
    HOGENOMi HOG000111597.
    KOi K02948.
    OMAi RTVGIFV.
    OrthoDBi EOG6ZSPF3.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-659-MONOMER.

    Family and domain databases

    Gene3Di 3.30.420.80. 1 hit.
    HAMAPi MF_01310. Ribosomal_S11.
    InterProi IPR001971. Ribosomal_S11.
    IPR019981. Ribosomal_S11_bac-type.
    IPR018102. Ribosomal_S11_CS.
    [Graphical view ]
    PANTHERi PTHR11759. PTHR11759. 1 hit.
    Pfami PF00411. Ribosomal_S11. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002131. Ribosomal_S11. 1 hit.
    TIGRFAMsi TIGR03632. bact_S11. 1 hit.
    PROSITEi PS00054. RIBOSOMAL_S11. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRS11_RICTY
    AccessioniPrimary (citable) accession number: Q68WA1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 20, 2007
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3