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Q68W94

- RL18_RICTY

UniProt

Q68W94 - RL18_RICTY

Protein

50S ribosomal protein L18

Gene

rplR

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-666-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L18UniRule annotation
    Gene namesi
    Name:rplRUniRule annotation
    Ordered Locus Names:RT0635
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11811850S ribosomal protein L18PRO_0000131333Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0635.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68W94.
    SMRiQ68W94. Positions 22-114.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L18P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0256.
    HOGENOMiHOG000248742.
    KOiK02881.
    OMAiKPRISIF.
    OrthoDBiEOG64NB48.

    Family and domain databases

    HAMAPiMF_01337_B. Ribosomal_L18_B.
    InterProiIPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view]
    PfamiPF00861. Ribosomal_L18p. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00060. L18_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q68W94-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRSAKLKFEK RKSRIRHKIS RTSNRVRLSV FKSGRHIYAQ IIDDSKSITI    50
    ASASTLDKTI KKIKKSHCNV ENAIKIGREI AKKANSAGIK EVVFDRGGYK 100
    YHGIIKALAD AAREKITF 118
    Length:118
    Mass (Da):13,343
    Last modified:October 11, 2004 - v1
    Checksum:i6597584BC7437F5D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04098.1.
    RefSeqiYP_067580.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04098; AAU04098; RT0635.
    GeneIDi2958795.
    KEGGirty:RT0635.
    PATRICi17910512. VBIRicTyp34752_0655.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04098.1 .
    RefSeqi YP_067580.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68W94.
    SMRi Q68W94. Positions 22-114.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0635.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04098 ; AAU04098 ; RT0635 .
    GeneIDi 2958795.
    KEGGi rty:RT0635.
    PATRICi 17910512. VBIRicTyp34752_0655.

    Phylogenomic databases

    eggNOGi COG0256.
    HOGENOMi HOG000248742.
    KOi K02881.
    OMAi KPRISIF.
    OrthoDBi EOG64NB48.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-666-MONOMER.

    Family and domain databases

    HAMAPi MF_01337_B. Ribosomal_L18_B.
    InterProi IPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view ]
    Pfami PF00861. Ribosomal_L18p. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00060. L18_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRL18_RICTY
    AccessioniPrimary (citable) accession number: Q68W94
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2005
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3