Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q68W94

- RL18_RICTY

UniProt

Q68W94 - RL18_RICTY

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

50S ribosomal protein L18

Gene

rplR

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-666-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotation
Gene namesi
Name:rplRUniRule annotation
Ordered Locus Names:RT0635
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11811850S ribosomal protein L18PRO_0000131333Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

Protein-protein interaction databases

STRINGi257363.RT0635.

Structurei

3D structure databases

ProteinModelPortaliQ68W94.
SMRiQ68W94. Positions 22-114.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L18P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0256.
HOGENOMiHOG000248742.
KOiK02881.
OMAiKPRISIF.
OrthoDBiEOG64NB48.

Family and domain databases

HAMAPiMF_01337_B. Ribosomal_L18_B.
InterProiIPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view]
PfamiPF00861. Ribosomal_L18p. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00060. L18_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q68W94-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRSAKLKFEK RKSRIRHKIS RTSNRVRLSV FKSGRHIYAQ IIDDSKSITI
60 70 80 90 100
ASASTLDKTI KKIKKSHCNV ENAIKIGREI AKKANSAGIK EVVFDRGGYK
110
YHGIIKALAD AAREKITF
Length:118
Mass (Da):13,343
Last modified:October 11, 2004 - v1
Checksum:i6597584BC7437F5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04098.1.
RefSeqiYP_067580.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04098; AAU04098; RT0635.
GeneIDi2958795.
KEGGirty:RT0635.
PATRICi17910512. VBIRicTyp34752_0655.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04098.1 .
RefSeqi YP_067580.1. NC_006142.1.

3D structure databases

ProteinModelPortali Q68W94.
SMRi Q68W94. Positions 22-114.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 257363.RT0635.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU04098 ; AAU04098 ; RT0635 .
GeneIDi 2958795.
KEGGi rty:RT0635.
PATRICi 17910512. VBIRicTyp34752_0655.

Phylogenomic databases

eggNOGi COG0256.
HOGENOMi HOG000248742.
KOi K02881.
OMAi KPRISIF.
OrthoDBi EOG64NB48.

Enzyme and pathway databases

BioCyci RTYP257363:GJEQ-666-MONOMER.

Family and domain databases

HAMAPi MF_01337_B. Ribosomal_L18_B.
InterProi IPR005484. Ribosomal_L18/L5.
IPR004389. Ribosomal_L18_bac-type.
[Graphical view ]
Pfami PF00861. Ribosomal_L18p. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00060. L18_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiRL18_RICTY
AccessioniPrimary (citable) accession number: Q68W94
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: October 11, 2004
Last modified: October 1, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3