Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q68W89 (RL24_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L24
Gene names
Name:rplX
Ordered Locus Names:RT0640
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length113 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01326

One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP-Rule MF_01326

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01326

Sequence similarities

Belongs to the ribosomal protein L24P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 11311350S ribosomal protein L24 HAMAP-Rule MF_01326
PRO_0000241656

Sequences

Sequence LengthMass (Da)Tools
Q68W89 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 49918EB6632D21E0

FASTA11312,262
        10         20         30         40         50         60 
MIKLKVKKGD EVIVVTGKYK GKKGKVLKVF IDENTVIVSG VNLVKKHTKP NKMSEGGIIT 

        70         80         90        100        110 
KESPIHISNV AHIDPKTGNP TKVAFKFLED GSKVRIAKKS GEIIGKVGND VKI 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU04103.1.
RefSeqYP_067585.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68W89.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0640.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU04103; AAU04103; RT0640.
GeneID2958773.
KEGGrty:RT0640.
PATRIC17910522. VBIRicTyp34752_0660.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0198.
HOGENOMHOG000039891.
KOK02895.
OMAVIQAYPA.
OrthoDBEOG6FFSDM.
ProtClustDBPRK00004.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-671-MONOMER.

Family and domain databases

Gene3D2.30.30.30. 1 hit.
HAMAPMF_01326_B. Ribosomal_L24_B.
InterProIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR12903. PTHR12903. 1 hit.
PfamPF00467. KOW. 1 hit.
[Graphical view]
SMARTSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMSSF50104. SSF50104. 1 hit.
TIGRFAMsTIGR01079. rplX_bact. 1 hit.
PROSITEPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL24_RICTY
AccessionPrimary (citable) accession number: Q68W89
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries