Q68W89 (RL24_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L24

Gene names

Name:	rplX
Ordered Locus Names:	RT0640

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group › Rickettsia typhi

Protein attributes

Sequence length	113 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01326 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP-Rule MF_01326
Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L24P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 113	113	50S ribosomal protein L24 HAMAP-Rule MF_01326		PRO_0000241656

Sequences

	Sequence		Length	Mass (Da)
	Q68W89 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 49918EB6632D21E0	FASTA	113	12,262
	10 20 30 40 50 60 MIKLKVKKGD EVIVVTGKYK GKKGKVLKVF IDENTVIVSG VNLVKKHTKP NKMSEGGIIT 70 80 90 100 110 KESPIHISNV AHIDPKTGNP TKVAFKFLED GSKVRIAKKS GEIIGKVGND VKI

References

[1]

"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017197 Genomic DNA. Translation: AAU04103.1.
RefSeq	YP_067585.1. NC_006142.1.
3D structure databases
ProteinModelPortal	Q68W89.
ModBase	Search...
Protein-protein interaction databases
STRING	257363.RT0640.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU04103; AAU04103; RT0640.
GeneID	2958773.
KEGG	rty:RT0640.
PATRIC	17910522. VBIRicTyp34752_0660.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0198.
HOGENOM	HOG000039891.
KO	K02895.
OMA	VIQAYPA.
ProtClustDB	PRK00004.
Enzyme and pathway databases
BioCyc	RTYP257363:GJEQ-671-MONOMER.
Family and domain databases
Gene3D	2.30.30.30. 1 hit.
HAMAP	MF_01326_B. Ribosomal_L24_B.
InterPro	IPR005824. KOW. IPR014722. Rib_L2_dom2. IPR003256. Ribosomal_L24. IPR005825. Ribosomal_L24/26_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
PANTHER	PTHR12903. PTHR12903. 1 hit.
Pfam	PF00467. KOW. 1 hit. [Graphical view]
SMART	SM00739. KOW. 1 hit. [Graphical view]
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01079. rplX_bact. 1 hit.
PROSITE	PS01108. RIBOSOMAL_L24. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL24_RICTY

Accession

Primary (citable) accession number: Q68W89

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 27, 2006
Last sequence update:	October 11, 2004
Last modified:	May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program