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Q68W89

- RL24_RICTY

UniProt

Q68W89 - RL24_RICTY

Protein

50S ribosomal protein L24

Gene

rplX

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
    One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-671-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L24UniRule annotation
    Gene namesi
    Name:rplXUniRule annotation
    Ordered Locus Names:RT0640
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11311350S ribosomal protein L24PRO_0000241656Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0640.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68W89.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L24P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0198.
    HOGENOMiHOG000039891.
    KOiK02895.
    OMAiQGGRIPQ.
    OrthoDBiEOG6FFSDM.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    HAMAPiMF_01326_B. Ribosomal_L24_B.
    InterProiIPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR12903. PTHR12903. 1 hit.
    PfamiPF00467. KOW. 1 hit.
    [Graphical view]
    SMARTiSM00739. KOW. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.
    TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
    PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68W89-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIKLKVKKGD EVIVVTGKYK GKKGKVLKVF IDENTVIVSG VNLVKKHTKP    50
    NKMSEGGIIT KESPIHISNV AHIDPKTGNP TKVAFKFLED GSKVRIAKKS 100
    GEIIGKVGND VKI 113
    Length:113
    Mass (Da):12,262
    Last modified:October 11, 2004 - v1
    Checksum:i49918EB6632D21E0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04103.1.
    RefSeqiYP_067585.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04103; AAU04103; RT0640.
    GeneIDi2958773.
    KEGGirty:RT0640.
    PATRICi17910522. VBIRicTyp34752_0660.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04103.1 .
    RefSeqi YP_067585.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68W89.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0640.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04103 ; AAU04103 ; RT0640 .
    GeneIDi 2958773.
    KEGGi rty:RT0640.
    PATRICi 17910522. VBIRicTyp34752_0660.

    Phylogenomic databases

    eggNOGi COG0198.
    HOGENOMi HOG000039891.
    KOi K02895.
    OMAi QGGRIPQ.
    OrthoDBi EOG6FFSDM.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-671-MONOMER.

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    HAMAPi MF_01326_B. Ribosomal_L24_B.
    InterProi IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR12903. PTHR12903. 1 hit.
    Pfami PF00467. KOW. 1 hit.
    [Graphical view ]
    SMARTi SM00739. KOW. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
    PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRL24_RICTY
    AccessioniPrimary (citable) accession number: Q68W89
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3