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Protein

50S ribosomal protein L29

Gene

rpmC

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-674-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29UniRule annotation
Gene namesi
Name:rpmCUniRule annotation
Ordered Locus Names:RT0643
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 717150S ribosomal protein L29PRO_0000130446Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0643.

Structurei

3D structure databases

ProteinModelPortaliQ68W86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L29P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0255.
HOGENOMiHOG000248754.
KOiK02904.
OMAiRANDFKE.
OrthoDBiEOG6VTK8Z.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68W86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDLKLLRSK LSTETIEELY KNLNLLKKEL FNLRFQQALG ELKNTSRFSL
60 70
VKKSIARIKT ELTKRSNSEE Y
Length:71
Mass (Da):8,406
Last modified:October 10, 2004 - v1
Checksum:iD3D06C34DA617C3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04106.1.
RefSeqiYP_067588.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04106; AAU04106; RT0643.
GeneIDi2958836.
KEGGirty:RT0643.
PATRICi17910528. VBIRicTyp34752_0663.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA. Translation: AAU04106.1.
RefSeqiYP_067588.1. NC_006142.1.

3D structure databases

ProteinModelPortaliQ68W86.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257363.RT0643.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU04106; AAU04106; RT0643.
GeneIDi2958836.
KEGGirty:RT0643.
PATRICi17910528. VBIRicTyp34752_0663.

Phylogenomic databases

eggNOGiCOG0255.
HOGENOMiHOG000248754.
KOiK02904.
OMAiRANDFKE.
OrthoDBiEOG6VTK8Z.

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-674-MONOMER.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiPS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiRL29_RICTY
AccessioniPrimary (citable) accession number: Q68W86
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 29, 2005
Last sequence update: October 10, 2004
Last modified: February 3, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.