Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q68W85

- RL16_RICTY

UniProt

Q68W85 - RL16_RICTY

Protein

50S ribosomal protein L16

Gene

rplP

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding, tRNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-675-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L16UniRule annotation
    Gene namesi
    Name:rplPUniRule annotation
    Ordered Locus Names:RT0644
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 13613650S ribosomal protein L16PRO_0000062190Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi257363.RT0644.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68W85.
    SMRiQ68W85. Positions 1-134.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L16P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0197.
    HOGENOMiHOG000164573.
    KOiK02878.
    OMAiSMESENE.
    OrthoDBiEOG6WHNWS.

    Family and domain databases

    Gene3Di3.90.1170.10. 1 hit.
    HAMAPiMF_01342. Ribosomal_L16.
    InterProiIPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view]
    PANTHERiPTHR12220. PTHR12220. 1 hit.
    PfamiPF00252. Ribosomal_L16. 1 hit.
    [Graphical view]
    PRINTSiPR00060. RIBOSOMALL16.
    SUPFAMiSSF54686. SSF54686. 1 hit.
    TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
    PROSITEiPS00586. RIBOSOMAL_L16_1. 1 hit.
    PS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68W85-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLAPKKQKFR KAHKGRVMSK AKAGMTLAFG SFGLKSIDGW RVTARQIEAG    50
    RKAATRCMKR QGRLWIRIFP DVPVSKKPAE VRMGKGKGAP EFFAVRVSPG 100
    RIMFEIEGVE ENIALRALEL ASAKLPVRTR IVRRYE 136
    Length:136
    Mass (Da):15,310
    Last modified:October 11, 2004 - v1
    Checksum:iE637B8226AE761C4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04107.1.
    RefSeqiYP_067589.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04107; AAU04107; RT0644.
    GeneIDi2958882.
    KEGGirty:RT0644.
    PATRICi17910530. VBIRicTyp34752_0664.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04107.1 .
    RefSeqi YP_067589.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68W85.
    SMRi Q68W85. Positions 1-134.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0644.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04107 ; AAU04107 ; RT0644 .
    GeneIDi 2958882.
    KEGGi rty:RT0644.
    PATRICi 17910530. VBIRicTyp34752_0664.

    Phylogenomic databases

    eggNOGi COG0197.
    HOGENOMi HOG000164573.
    KOi K02878.
    OMAi SMESENE.
    OrthoDBi EOG6WHNWS.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-675-MONOMER.

    Family and domain databases

    Gene3Di 3.90.1170.10. 1 hit.
    HAMAPi MF_01342. Ribosomal_L16.
    InterProi IPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view ]
    PANTHERi PTHR12220. PTHR12220. 1 hit.
    Pfami PF00252. Ribosomal_L16. 1 hit.
    [Graphical view ]
    PRINTSi PR00060. RIBOSOMALL16.
    SUPFAMi SSF54686. SSF54686. 1 hit.
    TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
    PROSITEi PS00586. RIBOSOMAL_L16_1. 1 hit.
    PS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRL16_RICTY
    AccessioniPrimary (citable) accession number: Q68W85
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 10, 2006
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3