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Q68W77

- RS10_RICTY

UniProt

Q68W77 - RS10_RICTY

Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Involved in the binding of tRNA to the ribosomes.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro
    2. tRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-683-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S10UniRule annotation
    Gene namesi
    Name:rpsJUniRule annotation
    Ordered Locus Names:RT0652
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 10510530S ribosomal protein S10PRO_0000237089Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi257363.RT0652.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68W77.
    SMRiQ68W77. Positions 4-101.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0051.
    HOGENOMiHOG000270246.
    KOiK02946.
    OMAiPHIDKES.
    OrthoDBiEOG6VXFHB.

    Family and domain databases

    Gene3Di3.30.70.600. 1 hit.
    HAMAPiMF_00508. Ribosomal_S10.
    InterProiIPR001848. Ribosomal_S10.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view]
    PANTHERiPTHR11700. PTHR11700. 1 hit.
    PfamiPF00338. Ribosomal_S10. 1 hit.
    [Graphical view]
    PRINTSiPR00971. RIBOSOMALS10.
    SUPFAMiSSF54999. SSF54999. 1 hit.
    TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q68W77-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNKIKIRLK SFDHRSLDQA TKEIVSAVKR TFATINGPIP LPRKIERFTV    50
    NRSPHVHKKS REQFEIRKHK RLLVIDDPNP AVVDALSKVD LAAGVDVVIE 100
    LENGE 105
    Length:105
    Mass (Da):11,959
    Last modified:October 11, 2004 - v1
    Checksum:i54EEECCDD8FFF400
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04115.1.
    RefSeqiYP_067597.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04115; AAU04115; RT0652.
    GeneIDi2958896.
    KEGGirty:RT0652.
    PATRICi17910546. VBIRicTyp34752_0672.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04115.1 .
    RefSeqi YP_067597.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68W77.
    SMRi Q68W77. Positions 4-101.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0652.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04115 ; AAU04115 ; RT0652 .
    GeneIDi 2958896.
    KEGGi rty:RT0652.
    PATRICi 17910546. VBIRicTyp34752_0672.

    Phylogenomic databases

    eggNOGi COG0051.
    HOGENOMi HOG000270246.
    KOi K02946.
    OMAi PHIDKES.
    OrthoDBi EOG6VXFHB.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-683-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.600. 1 hit.
    HAMAPi MF_00508. Ribosomal_S10.
    InterProi IPR001848. Ribosomal_S10.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view ]
    PANTHERi PTHR11700. PTHR11700. 1 hit.
    Pfami PF00338. Ribosomal_S10. 1 hit.
    [Graphical view ]
    PRINTSi PR00971. RIBOSOMALS10.
    SUPFAMi SSF54999. SSF54999. 1 hit.
    TIGRFAMsi TIGR01049. rpsJ_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiRS10_RICTY
    AccessioniPrimary (citable) accession number: Q68W77
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2006
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3