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Q68W77 (RS10_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S10
Gene names
Name:rpsJ
Ordered Locus Names:RT0652
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length105 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the binding of tRNA to the ribosomes By similarity. HAMAP-Rule MF_00508

Sequence similarities

Belongs to the ribosomal protein S10P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

tRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 10510530S ribosomal protein S10 HAMAP-Rule MF_00508
PRO_0000237089

Sequences

Sequence LengthMass (Da)Tools
Q68W77 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 54EEECCDD8FFF400

FASTA10511,959
        10         20         30         40         50         60 
MKNKIKIRLK SFDHRSLDQA TKEIVSAVKR TFATINGPIP LPRKIERFTV NRSPHVHKKS 

        70         80         90        100 
REQFEIRKHK RLLVIDDPNP AVVDALSKVD LAAGVDVVIE LENGE 

« Hide

References

[1]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017197 Genomic DNA. Translation: AAU04115.1.
RefSeqYP_067597.1. NC_006142.1.

3D structure databases

ProteinModelPortalQ68W77.
SMRQ68W77. Positions 4-101.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0652.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU04115; AAU04115; RT0652.
GeneID2958896.
KEGGrty:RT0652.
PATRIC17910546. VBIRicTyp34752_0672.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0051.
HOGENOMHOG000270246.
KOK02946.
OMAPHIDKES.
OrthoDBEOG6VXFHB.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-683-MONOMER.

Family and domain databases

Gene3D3.30.70.600. 1 hit.
HAMAPMF_00508. Ribosomal_S10.
InterProIPR001848. Ribosomal_S10.
IPR027486. Ribosomal_S10_dom.
[Graphical view]
PANTHERPTHR11700. PTHR11700. 1 hit.
PfamPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSPR00971. RIBOSOMALS10.
SUPFAMSSF54999. SSF54999. 1 hit.
TIGRFAMsTIGR01049. rpsJ_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS10_RICTY
AccessionPrimary (citable) accession number: Q68W77
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries