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Q68W69

- CSPA_RICTY

UniProt

Q68W69 - CSPA_RICTY

Protein

Cold shock-like protein CspA

Gene

cspA

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Molecular functioni

    Activator

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciRTYP257363:GJEQ-694-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Cold shock-like protein CspA
    Gene namesi
    Name:cspA
    Ordered Locus Names:RT0662
    OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
    Taxonomic identifieri257363 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
    ProteomesiUP000000604: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7070Cold shock-like protein CspAPRO_0000281065Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi257363.RT0662.

    Structurei

    3D structure databases

    ProteinModelPortaliQ68W69.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini7 – 6761CSDAdd
    BLAST

    Sequence similaritiesi

    Contains 1 CSD (cold-shock) domain.Curated

    Phylogenomic databases

    eggNOGiCOG1278.
    HOGENOMiHOG000070673.
    KOiK03704.
    OMAiFICKDQG.
    OrthoDBiEOG618R0J.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR019844. Cold-shock_CS.
    IPR012156. Cold_shock_CspA.
    IPR011129. Cold_shock_prot.
    IPR002059. CSP_DNA-bd.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00313. CSD. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
    PRINTSiPR00050. COLDSHOCK.
    SMARTiSM00357. CSP. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00352. COLD_SHOCK. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68W69-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATNIVGKVK WYNSTKNFGF IEQDNGGKDV FVHKSAIEAA GLHSLKERQE   50
    VIFDIEEKQG KAYAINLRVK 70
    Length:70
    Mass (Da):7,911
    Last modified:October 11, 2004 - v1
    Checksum:i0ED44B9FB3561B3F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04123.1.
    RefSeqiYP_067605.1. NC_006142.1.

    Genome annotation databases

    EnsemblBacteriaiAAU04123; AAU04123; RT0662.
    GeneIDi2958782.
    KEGGirty:RT0662.
    PATRICi17910566. VBIRicTyp34752_0680.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017197 Genomic DNA. Translation: AAU04123.1 .
    RefSeqi YP_067605.1. NC_006142.1.

    3D structure databases

    ProteinModelPortali Q68W69.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257363.RT0662.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU04123 ; AAU04123 ; RT0662 .
    GeneIDi 2958782.
    KEGGi rty:RT0662.
    PATRICi 17910566. VBIRicTyp34752_0680.

    Phylogenomic databases

    eggNOGi COG1278.
    HOGENOMi HOG000070673.
    KOi K03704.
    OMAi FICKDQG.
    OrthoDBi EOG618R0J.

    Enzyme and pathway databases

    BioCyci RTYP257363:GJEQ-694-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR019844. Cold-shock_CS.
    IPR012156. Cold_shock_CspA.
    IPR011129. Cold_shock_prot.
    IPR002059. CSP_DNA-bd.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00313. CSD. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002599. Cold_shock_A. 1 hit.
    PRINTSi PR00050. COLDSHOCK.
    SMARTi SM00357. CSP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00352. COLD_SHOCK. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-144 / Wilmington.

    Entry informationi

    Entry nameiCSPA_RICTY
    AccessioniPrimary (citable) accession number: Q68W69
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 20, 2007
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia typhi
      Rickettsia typhi (strain Wilmington): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3