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Protein

Cold shock-like protein CspA

Gene

cspA

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciRTYP257363:G1G0L-667-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspA
Gene namesi
Name:cspA
Ordered Locus Names:RT0662
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
Proteomesi
  • UP000000604 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002810651 – 70Cold shock-like protein CspAAdd BLAST70

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0662

Structurei

3D structure databases

ProteinModelPortaliQ68W69
SMRiQ68W69
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 67CSDAdd BLAST61

Phylogenomic databases

eggNOGiENOG4105VEQ Bacteria
COG1278 LUCA
HOGENOMiHOG000070673
KOiK03704
OMAiQVEFEIQ
OrthoDBiPOG091H01GR

Family and domain databases

CDDicd04458 CSP_CDS, 1 hit
InterProiView protein in InterPro
IPR019844 Cold-shock_CS
IPR012156 Cold_shock_CspA
IPR011129 CSD
IPR002059 CSP_DNA-bd
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF00313 CSD, 1 hit
PIRSFiPIRSF002599 Cold_shock_A, 1 hit
PRINTSiPR00050 COLDSHOCK
SMARTiView protein in SMART
SM00357 CSP, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00352 CSD_1, 1 hit
PS51857 CSD_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q68W69-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATNIVGKVK WYNSTKNFGF IEQDNGGKDV FVHKSAIEAA GLHSLKERQE
60 70
VIFDIEEKQG KAYAINLRVK
Length:70
Mass (Da):7,911
Last modified:October 11, 2004 - v1
Checksum:i0ED44B9FB3561B3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017197 Genomic DNA Translation: AAU04123.1
RefSeqiWP_011191100.1, NC_006142.1

Genome annotation databases

EnsemblBacteriaiAAU04123; AAU04123; RT0662
KEGGirty:RT0662

Similar proteinsi

Entry informationi

Entry nameiCSPA_RICTY
AccessioniPrimary (citable) accession number: Q68W69
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome
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Main funding by: National Institutes of Health