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Q68W69

- CSPA_RICTY

UniProt

Q68W69 - CSPA_RICTY

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Protein

Cold shock-like protein CspA

Gene

cspA

Organism
Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciRTYP257363:GJEQ-694-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cold shock-like protein CspA
Gene namesi
Name:cspA
Ordered Locus Names:RT0662
OrganismiRickettsia typhi (strain ATCC VR-144 / Wilmington)
Taxonomic identifieri257363 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group
ProteomesiUP000000604: Chromosome

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7070Cold shock-like protein CspAPRO_0000281065Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257363.RT0662.

Structurei

3D structure databases

ProteinModelPortaliQ68W69.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 6761CSDAdd
BLAST

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.Curated

Phylogenomic databases

eggNOGiCOG1278.
HOGENOMiHOG000070673.
KOiK03704.
OMAiFICKDQG.
OrthoDBiEOG618R0J.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PIRSFiPIRSF002599. Cold_shock_A. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68W69 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATNIVGKVK WYNSTKNFGF IEQDNGGKDV FVHKSAIEAA GLHSLKERQE
60 70
VIFDIEEKQG KAYAINLRVK
Length:70
Mass (Da):7,911
Last modified:October 11, 2004 - v1
Checksum:i0ED44B9FB3561B3F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU04123.1.
RefSeqiYP_067605.1. NC_006142.1.

Genome annotation databases

EnsemblBacteriaiAAU04123; AAU04123; RT0662.
GeneIDi2958782.
KEGGirty:RT0662.
PATRICi17910566. VBIRicTyp34752_0680.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017197 Genomic DNA. Translation: AAU04123.1 .
RefSeqi YP_067605.1. NC_006142.1.

3D structure databases

ProteinModelPortali Q68W69.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 257363.RT0662.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU04123 ; AAU04123 ; RT0662 .
GeneIDi 2958782.
KEGGi rty:RT0662.
PATRICi 17910566. VBIRicTyp34752_0680.

Phylogenomic databases

eggNOGi COG1278.
HOGENOMi HOG000070673.
KOi K03704.
OMAi FICKDQG.
OrthoDBi EOG618R0J.

Enzyme and pathway databases

BioCyci RTYP257363:GJEQ-694-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR019844. Cold-shock_CS.
IPR012156. Cold_shock_CspA.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF00313. CSD. 1 hit.
[Graphical view ]
PIRSFi PIRSF002599. Cold_shock_A. 1 hit.
PRINTSi PR00050. COLDSHOCK.
SMARTi SM00357. CSP. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00352. COLD_SHOCK. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-144 / Wilmington.

Entry informationi

Entry nameiCSPA_RICTY
AccessioniPrimary (citable) accession number: Q68W69
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: October 11, 2004
Last modified: October 29, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia typhi
    Rickettsia typhi (strain Wilmington): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3