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Q68SN8

- FCRL5_MOUSE

UniProt

Q68SN8 - FCRL5_MOUSE

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Protein
Fc receptor-like protein 5
Gene
Fcrl5, Fcrh3
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: MGI
Complete GO annotation...

GO - Biological processi

  1. negative regulation of B cell receptor signaling pathway Source: MGI
  2. negative regulation of release of sequestered calcium ion into cytosol Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Fc receptor-like protein 5
Short name:
FcR-like protein 5
Short name:
FcRL5
Alternative name(s):
BXMAS1-like protein 2
Short name:
mBXMH2
Fc receptor homolog 3
Short name:
FcRH3
Short name:
moFcRH3
CD_antigen: CD307e
Gene namesi
Name:Fcrl5
Synonyms:Fcrh3
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:3053558. Fcrl5.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini27 – 496470Extracellular Reviewed prediction
Add
BLAST
Transmembranei497 – 51721Helical; Reviewed prediction
Add
BLAST
Topological domaini518 – 59679Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: MGI
  3. receptor complex Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 Reviewed prediction
Add
BLAST
Chaini27 – 596570Fc receptor-like protein 5
PRO_0000331641Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi55 ↔ 99 By similarity
Disulfide bondi137 ↔ 181 By similarity
Disulfide bondi228 ↔ 277 By similarity
Glycosylationi324 – 3241N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi325 ↔ 373 By similarity
Disulfide bondi419 ↔ 466 By similarity
Glycosylationi436 – 4361N-linked (GlcNAc...) Reviewed prediction

Post-translational modificationi

Phosphorylated on cytoplasmic tyrosines; required for interaction with protein tyrosine phosphatases and protein tyrosine kinases By similarity.

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiQ68SN8.
PRIDEiQ68SN8.

PTM databases

PhosphoSiteiQ68SN8.

Expressioni

Tissue specificityi

Preferentially expressed in marginal zone B cells.1 Publication

Gene expression databases

ArrayExpressiQ68SN8.
BgeeiQ68SN8.
GenevestigatoriQ68SN8.

Interactioni

Subunit structurei

Interacts with PTPN6, PTPN11, SYK and ZAP70 By similarity.

Structurei

3D structure databases

ProteinModelPortaliQ68SN8.
SMRiQ68SN8. Positions 33-482.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 11582Ig-like C2-type 1
Add
BLAST
Domaini106 – 19994Ig-like C2-type 2
Add
BLAST
Domaini207 – 29488Ig-like C2-type 3
Add
BLAST
Domaini296 – 38489Ig-like C2-type 4
Add
BLAST
Domaini398 – 48386Ig-like C2-type 5
Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Immunoglobulin domain, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG151212.
GeneTreeiENSGT00560000076958.
HOGENOMiHOG000036945.
HOVERGENiHBG074073.
InParanoidiQ68SN8.

Family and domain databases

Gene3Di2.60.40.10. 5 hits.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
[Graphical view]
SMARTiSM00409. IG. 1 hit.
SM00408. IGc2. 2 hits.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 5 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q68SN8-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MSGSFSPCVV FTQMWLTLLV VTPVNGQHEA AQQSVVSLQP PWTTFFRGEV    50
VTLTCYRFGF SVPQKTKWYQ KRKTVKQTPG ALVIKAHTLK VHESGEYWCQ 100
ADSLLPSMHV NVEFSEDFLV LQAPPAVFEG DSVVLRCYAK KGIEAETLTF 150
YKDGKALTLH PQSSEFYIHR ANLKDNGQYK CTSKKKWSFG SLYTSNTVVV 200
QVQELFPRPV LRARPSHPID GSPVTLTCQT QLSAQKSDAR LQFCFFRNLQ 250
LLGSGCSRSS EFHIPAIWTE ESKRYQCKAE TVNSQVSKQS TAFIIPVQRA 300
SARFQTHIIP ASKLVFEGQL LLLNCSVKGV PGPLKFSWYK KDMLNKETKI 350
LKSSNAEFKI SQVNISDAGE YYCEANNSRR SFVSRAFPIT IKVPVSQPVL 400
TLSTGKTQAL EGDLMTLHCQ SQRGSPCILY EFFYENVSLG NSSILSGGGA 450
YFNFSMSTER SGNYYCTADN GLGAQCSEAI RISIFDMTKN RSVPMAAGIT 500
VGLLIMAVGV FLFYCWFSRK AGGKPTSDDS RNPSDSEPQE PTYYNVPACI 550
ELQPVYSNEP EENVIYTEVR RTQPRQKHAD QESESPRSRC QMAEKK 596
Length:596
Mass (Da):66,779
Last modified:July 27, 2011 - v3
Checksum:i3EF9C7E4728461B4
GO
Isoform 2 (identifier: Q68SN8-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     29-116: Missing.

Note: No experimental confirmation available.

Show »
Length:508
Mass (Da):56,709
Checksum:i9E86672E7DDC03ED
GO

Sequence cautioni

The sequence AAO20873.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei29 – 11688Missing in isoform 2.
VSP_033309Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti161 – 1633PQS → HQ in AAS91578. 1 Publication
Sequence conflicti161 – 1633PQS → HQ in AAO20873. 1 Publication
Sequence conflicti166 – 1661F → L in BAC40954. 1 Publication
Sequence conflicti167 – 1671Y → S in AAS91578. 1 Publication
Sequence conflicti167 – 1671Y → S in AAO20873. 1 Publication
Sequence conflicti170 – 1701R → H in BAC40954. 1 Publication
Sequence conflicti199 – 1991V → R in AAS91578. 1 Publication
Sequence conflicti199 – 1991V → R in AAO20873. 1 Publication
Sequence conflicti273 – 2731K → R in AAS91578. 1 Publication
Sequence conflicti273 – 2731K → R in AAO20873. 1 Publication
Sequence conflicti287 – 2871S → R in AAS91578. 1 Publication
Sequence conflicti287 – 2871S → R in AAO20873. 1 Publication
Sequence conflicti287 – 2871S → R in BAC40954. 1 Publication
Sequence conflicti346 – 3461K → E in AAS91578. 1 Publication
Sequence conflicti346 – 3461K → E in AAO20873. 1 Publication
Sequence conflicti372 – 3721Y → H in AAS91578. 1 Publication
Sequence conflicti372 – 3721Y → H in AAO20873. 1 Publication
Sequence conflicti373 – 3731C → R in BAC40954. 1 Publication
Sequence conflicti376 – 3761N → T in AAS91578. 1 Publication
Sequence conflicti376 – 3761N → T in AAO20873. 1 Publication
Sequence conflicti376 – 3761N → T in BAC40954. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY506558 mRNA. Translation: AAS91578.1.
AY158090 mRNA. Translation: AAO20873.1. Different initiation.
AK089756 mRNA. Translation: BAC40954.1.
AC163618 Genomic DNA. No translation available.
CCDSiCCDS50943.1. [Q68SN8-1]
CCDS50944.1. [Q68SN8-2]
RefSeqiNP_001106709.1. NM_001113238.1. [Q68SN8-2]
NP_899045.3. NM_183222.3. [Q68SN8-1]
UniGeneiMm.331122.

Genome annotation databases

EnsembliENSMUST00000049926; ENSMUSP00000050151; ENSMUSG00000048031. [Q68SN8-1]
ENSMUST00000166297; ENSMUSP00000131176; ENSMUSG00000048031. [Q68SN8-2]
GeneIDi329693.
KEGGimmu:329693.
UCSCiuc008psf.1. mouse. [Q68SN8-2]
uc012crg.1. mouse. [Q68SN8-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY506558 mRNA. Translation: AAS91578.1 .
AY158090 mRNA. Translation: AAO20873.1 . Different initiation.
AK089756 mRNA. Translation: BAC40954.1 .
AC163618 Genomic DNA. No translation available.
CCDSi CCDS50943.1. [Q68SN8-1 ]
CCDS50944.1. [Q68SN8-2 ]
RefSeqi NP_001106709.1. NM_001113238.1. [Q68SN8-2 ]
NP_899045.3. NM_183222.3. [Q68SN8-1 ]
UniGenei Mm.331122.

3D structure databases

ProteinModelPortali Q68SN8.
SMRi Q68SN8. Positions 33-482.
ModBasei Search...

PTM databases

PhosphoSitei Q68SN8.

Proteomic databases

PaxDbi Q68SN8.
PRIDEi Q68SN8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000049926 ; ENSMUSP00000050151 ; ENSMUSG00000048031 . [Q68SN8-1 ]
ENSMUST00000166297 ; ENSMUSP00000131176 ; ENSMUSG00000048031 . [Q68SN8-2 ]
GeneIDi 329693.
KEGGi mmu:329693.
UCSCi uc008psf.1. mouse. [Q68SN8-2 ]
uc012crg.1. mouse. [Q68SN8-1 ]

Organism-specific databases

CTDi 83416.
MGIi MGI:3053558. Fcrl5.

Phylogenomic databases

eggNOGi NOG151212.
GeneTreei ENSGT00560000076958.
HOGENOMi HOG000036945.
HOVERGENi HBG074073.
InParanoidi Q68SN8.

Miscellaneous databases

NextBioi 398903.
PROi Q68SN8.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q68SN8.
Bgeei Q68SN8.
Genevestigatori Q68SN8.

Family and domain databases

Gene3Di 2.60.40.10. 5 hits.
InterProi IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
[Graphical view ]
SMARTi SM00409. IG. 1 hit.
SM00408. IGc2. 2 hits.
[Graphical view ]
PROSITEi PS50835. IG_LIKE. 5 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Differential B cell expression of mouse Fc receptor homologs."
    Davis R.S., Stephan R.P., Chen C.-C., Dennis G. Jr., Cooper M.D.
    Int. Immunol. 16:1343-1353(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY.
    Strain: BALB/c.
    Tissue: Spleen.
  2. "Molecular cloning of mouse BXMAS1 homologs; homologous to IgFc receptor."
    Nakayama Y., Maher S.E., Weissman S.M., Bothwell A.L.M.
    Submitted (OCT-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
    Strain: C57BL/6J.
  3. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: NOD.
    Tissue: Spleen.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.

Entry informationi

Entry nameiFCRL5_MOUSE
AccessioniPrimary (citable) accession number: Q68SN8
Secondary accession number(s): E9QLI5, Q80WN2, Q8BJA5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 79 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi