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Q68IQ4

- Q68IQ4_PIG

UniProt

Q68IQ4 - Q68IQ4_PIG

Protein
Submitted name:

Interferon beta protein

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Biological processi

    1. defense response to virus Source: UniProtKB-KW

    Keywords - Molecular functioni

    CytokineUniRule annotationSAAS annotation

    Keywords - Biological processi

    Antiviral defenseUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Interferon beta proteinImported
    Submitted name:
    Interferon-betaImported
    OrganismiSus scrofa (Pig)Imported
    Taxonomic identifieri9823 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

    Subcellular locationi

    Secreted SAAS annotation

    GO - Cellular componenti

    1. extracellular space Source: UniProtKB-KW

    Keywords - Cellular componenti

    SecretedSAAS annotation

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliQ68IQ4.
    SMRiQ68IQ4. Positions 22-186.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alpha/beta interferon family.UniRule annotation

    Phylogenomic databases

    HOVERGENiHBG052086.
    KOiK05415.

    Family and domain databases

    Gene3Di1.20.1250.10. 1 hit.
    InterProiIPR009079. 4_helix_cytokine-like_core.
    IPR012351. 4_helix_cytokine_core.
    IPR000471. Interferon_alpha/beta/delta.
    IPR015588. Interferon_beta.
    [Graphical view]
    PANTHERiPTHR11691. PTHR11691. 1 hit.
    PTHR11691:SF7. PTHR11691:SF7. 1 hit.
    PfamiPF00143. Interferon. 1 hit.
    [Graphical view]
    PRINTSiPR00266. INTERFERONAB.
    SMARTiSM00076. IFabd. 1 hit.
    [Graphical view]
    SUPFAMiSSF47266. SSF47266. 1 hit.
    PROSITEiPS00252. INTERFERON_A_B_D. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q68IQ4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANKCILQIA LLMCFSTTAL SMSYDVLRYQ QRSSNLACQK LLEQLPGTPQ    50
    YCLEDRMNFE VPEEIMQPPQ FQKEDAVLII HEMLQQIFGI LRRNFSSTGW 100
    NETVIKTILV ELDGQMDDLE TILEEIMEEE NFPRGDMTIL HLKKYYLSIL 150
    QYLKSKEYRS CAWTVVQVEI LRNFSFLNRL TDYLRN 186
    Length:186
    Mass (Da):21,950
    Last modified:October 11, 2004 - v1
    Checksum:i79D70E53C3ADD6DC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY687281 mRNA. Translation: AAT98375.1.
    KJ147517 mRNA. Translation: AHN82310.1.
    RefSeqiNP_001003923.1. NM_001003923.1.
    UniGeneiSsc.42778.

    Genome annotation databases

    GeneIDi445459.
    KEGGissc:445459.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY687281 mRNA. Translation: AAT98375.1 .
    KJ147517 mRNA. Translation: AHN82310.1 .
    RefSeqi NP_001003923.1. NM_001003923.1.
    UniGenei Ssc.42778.

    3D structure databases

    ProteinModelPortali Q68IQ4.
    SMRi Q68IQ4. Positions 22-186.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 445459.
    KEGGi ssc:445459.

    Organism-specific databases

    CTDi 3456.

    Phylogenomic databases

    HOVERGENi HBG052086.
    KOi K05415.

    Family and domain databases

    Gene3Di 1.20.1250.10. 1 hit.
    InterProi IPR009079. 4_helix_cytokine-like_core.
    IPR012351. 4_helix_cytokine_core.
    IPR000471. Interferon_alpha/beta/delta.
    IPR015588. Interferon_beta.
    [Graphical view ]
    PANTHERi PTHR11691. PTHR11691. 1 hit.
    PTHR11691:SF7. PTHR11691:SF7. 1 hit.
    Pfami PF00143. Interferon. 1 hit.
    [Graphical view ]
    PRINTSi PR00266. INTERFERONAB.
    SMARTi SM00076. IFabd. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47266. SSF47266. 1 hit.
    PROSITEi PS00252. INTERFERON_A_B_D. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Clone and analysis of meishan porcine interferon beta gene."
      Qian P., Peng G.Q., Li X.M., Yao Q.X., Xu Z.F., Guo D.C., Chen H.C.
      Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. Hu X.
      Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: SpleenImported.

    Entry informationi

    Entry nameiQ68IQ4_PIG
    AccessioniPrimary (citable) accession number: Q68IQ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2004
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)