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Q68IQ4 (Q68IQ4_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Interferon-beta EMBL AHN82310.1
OrganismSus scrofa (Pig) EMBL AAT98375.1
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length186 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Secreted By similarity SAAS SAAS009079.

Sequence similarities

Belongs to the alpha/beta interferon family. RuleBase RU000436

Ontologies

Keywords
   Biological processAntiviral defense SAAS SAAS009079 RuleBase RU000436
   Cellular componentSecreted SAAS SAAS000471
   Molecular functionCytokine SAAS SAAS009079 RuleBase RU000436
   PTMDisulfide bond SAAS SAAS000471
Gene Ontology (GO)
   Biological_processdefense response to virus

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular space

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q68IQ4 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 79D70E53C3ADD6DC

FASTA18621,950
        10         20         30         40         50         60 
MANKCILQIA LLMCFSTTAL SMSYDVLRYQ QRSSNLACQK LLEQLPGTPQ YCLEDRMNFE 

        70         80         90        100        110        120 
VPEEIMQPPQ FQKEDAVLII HEMLQQIFGI LRRNFSSTGW NETVIKTILV ELDGQMDDLE 

       130        140        150        160        170        180 
TILEEIMEEE NFPRGDMTIL HLKKYYLSIL QYLKSKEYRS CAWTVVQVEI LRNFSFLNRL 


TDYLRN 

« Hide

References

[1]"Clone and analysis of meishan porcine interferon beta gene."
Qian P., Peng G.Q., Li X.M., Yao Q.X., Xu Z.F., Guo D.C., Chen H.C.
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Hu X.
Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Spleen EMBL AHN82310.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY687281 mRNA. Translation: AAT98375.1.
KJ147517 mRNA. Translation: AHN82310.1.
RefSeqNP_001003923.1. NM_001003923.1.
UniGeneSsc.42778.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID445459.
KEGGssc:445459.

Organism-specific databases

CTD3456.

Phylogenomic databases

HOVERGENHBG052086.
KOK05415.

Family and domain databases

Gene3D1.20.1250.10. 1 hit.
InterProIPR009079. 4_helix_cytokine-like_core.
IPR012351. 4_helix_cytokine_core.
IPR000471. Interferon_alpha/beta/delta.
IPR015588. Interferon_beta.
[Graphical view]
PANTHERPTHR11691. PTHR11691. 1 hit.
PTHR11691:SF7. PTHR11691:SF7. 1 hit.
PfamPF00143. Interferon. 1 hit.
[Graphical view]
PRINTSPR00266. INTERFERONAB.
SMARTSM00076. IFabd. 1 hit.
[Graphical view]
SUPFAMSSF47266. SSF47266. 1 hit.
PROSITEPS00252. INTERFERON_A_B_D. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ68IQ4_PIG
AccessionPrimary (citable) accession number: Q68IQ4
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: July 9, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)