Unreviewed, UniProtKB/TrEMBL Q68G41 (Q68G41_RAT)

Names and origin

Protein names

Submitted name:
    Dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase) EMBL AAH78705.1
Submitted name:
    Dodecenoyl-coenzyme A delta isomerase EMBL EDM03825.1

Gene names

Name:	Dci RGD 61892
ORF Names:	rCG_33892 EMBL EDM03825.1

Organism

Rattus norvegicus (Rat) EMBL AAH78705.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the enoyl-CoA hydratase/isomerase family.

Ontologies

Keywords
Molecular function	Isomerase EMBL AAH78705.1
Gene Ontology (GO)
Biological process	fatty acid beta-oxidation Traceable author statement. Source: RGD
Cellular component	mitochondrial inner membrane Inferred from electronic annotation. Source: Compara
Molecular function	dodecenoyl-CoA delta-isomerase activity Inferred from direct assay. Source: RGD identical protein binding Inferred from direct assay. Source: RGD
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q68G41-1 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: 79D2CD1F9CC7FF16	FASTA	289	32,264
	10 20 30 40 50 60 MALAAARRVL LQAGSRLGRR GAVDGARRFS NKRVLVEKEG EAGIAVMKFK NPPVNSLSLE 70 80 90 100 110 120 FLTEFVISLE KLENDKSIRG VILTSERPGI FSAGLDLMEM YGRNPAHYAE YWKAVQELWL 130 140 150 160 170 180 RLYLSNLTLI SAINGASPAG GCLMALTCDY RIMADNPKYT IGLNESLLGI VAPFWLKDNY 190 200 210 220 230 240 VNTIGHRAAE RALQLGTLFP PAEALKVGLV DEVVPEDQVH SKARSVMAKW FTIPDHSRQL 250 260 270 280 TKSMMRKATA DNLIKQREAD IQNFTSFISR DSIQKSLHVY LEKLKQKKG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Kidney EMBL AAH78705.1.
[2]	"Gene and alternative splicing annotation with AIR." Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G. Genome Res. 15:54-66(2005) [PubMed: 15632090] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDM03825.1.
[3]	Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDM03825.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC078705 mRNA. Translation: AAH78705.1. CH473948 Genomic DNA. Translation: EDM03825.1.
IPI	IPI00882405.
RefSeq	NP_059002.2.
UniGene	Rn.80835
3D structure databases
SMR	Q68G41. Positions 29-285.
ModBase	Search...
Protein-protein interaction databases
STRING	Q68G41.
Genome annotation databases
Ensembl	ENSRNOT00000011784; ENSRNOP00000011784; ENSRNOG00000008843; Rattus norvegicus. [Genome view]
GeneID	29740.
KEGG	rno:29740.
Organism-specific databases
CTD	29740.
Phylogenomic databases
HOVERGEN	Q68G41.
InParanoid	Q68G41.
OMA	FKNPPVN.
OrthoDB	EOG986C02.
PhylomeDB	Q68G41.
Gene expression databases
ArrayExpress	Q68G41.
Genevestigator	Q68G41.
Family and domain databases
InterPro	IPR001753. Crotonase_core. IPR018376. Enoyl-CoA_hyd/isom_CS. [Graphical view]
Pfam	PF00378. ECH. 1 hit. [Graphical view]
PROSITE	PS00166. ENOYL_COA_HYDRATASE. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	610244.

Entry information

Entry name

Q68G41_RAT

Accession

Primary (citable) accession number: Q68G41

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	February 9, 2010
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)