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Protein

Suppressor of tumorigenicity 7 protein-like

Gene

St7l

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Suppressor of tumorigenicity 7 protein-like
Gene namesi
Name:St7l
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1359336. St7l.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei83 – 103HelicalSequence analysisAdd BLAST21
Transmembranei513 – 533HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003392291 – 559Suppressor of tumorigenicity 7 protein-likeAdd BLAST559

Proteomic databases

PaxDbiQ68FW3.
PRIDEiQ68FW3.

Expressioni

Gene expression databases

BgeeiENSRNOG00000014002.
ExpressionAtlasiQ68FW3. differential.
GenevisibleiQ68FW3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019129.

Family & Domainsi

Sequence similaritiesi

Belongs to the ST7 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3807. Eukaryota.
ENOG410XQ2Z. LUCA.
GeneTreeiENSGT00390000000873.
HOGENOMiHOG000036528.
HOVERGENiHBG054916.
InParanoidiQ68FW3.
PhylomeDBiQ68FW3.
TreeFamiTF314162.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR007311. ST7.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PANTHERiPTHR12745. PTHR12745. 1 hit.
PfamiPF04184. ST7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68FW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADGDYFAEA ARAVGCPHAP VPGLGLGPPL GWKERLKAGL ANSGSTLWFL
60 70 80 90 100
AGLGLLYALR VPLRLCDNVT AVTGFLSSLT PKFYVALTGT SSLISGLIFI
110 120 130 140 150
FEWWYFHKHG TSFIEQVSIS HLRPLMGGTE SSISEPGSPA NSRESETLRH
160 170 180 190 200
HHLSECKVWR NPLNLFRGAE YRRYTWVTGK EPLTYYDMNL SAQDHQTFFT
210 220 230 240 250
CETDFLRPSD TVMQKAWRER NPPARIKAAY QALELNNDCA TAYVLLAEEE
260 270 280 290 300
ATTIVDAERL FKQALRAGEI IYRRSQQCQH QSPQHEAQLR RDTNVLVYIK
310 320 330 340 350
RRLAMCARKL GRIREAVKIM RDLMKEFPPL TMLNIHENLL ESLLELQAYA
360 370 380 390 400
DVQAVLAKYD DISLPKSAAI CYTAALLKTR TVSDKFSPET AFRKGLSTAE
410 420 430 440 450
INAVEAIHRA VEFNPHVPKY LLEMKSLILP PEHILKRGDS EAIAYAFFHL
460 470 480 490 500
QHWKRIEGAL NLLQCTWEGT FRMIPYPLEK GHLFYPYPSC TETADRELLP
510 520 530 540 550
TFHHVSVYPK KELPFFIHFT AGLCSSTAMI ALLTHQFPEV MGVFAKAVSM

ISRTCVEYL
Length:559
Mass (Da):63,334
Last modified:October 11, 2004 - v1
Checksum:i27065D73FA33601E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079194 mRNA. Translation: AAH79194.1.
RefSeqiNP_001007640.1. NM_001007639.1.
UniGeneiRn.102337.

Genome annotation databases

EnsembliENSRNOT00000019129; ENSRNOP00000019129; ENSRNOG00000014002.
GeneIDi295344.
KEGGirno:295344.
UCSCiRGD:1359336. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079194 mRNA. Translation: AAH79194.1.
RefSeqiNP_001007640.1. NM_001007639.1.
UniGeneiRn.102337.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019129.

Proteomic databases

PaxDbiQ68FW3.
PRIDEiQ68FW3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000019129; ENSRNOP00000019129; ENSRNOG00000014002.
GeneIDi295344.
KEGGirno:295344.
UCSCiRGD:1359336. rat.

Organism-specific databases

CTDi54879.
RGDi1359336. St7l.

Phylogenomic databases

eggNOGiKOG3807. Eukaryota.
ENOG410XQ2Z. LUCA.
GeneTreeiENSGT00390000000873.
HOGENOMiHOG000036528.
HOVERGENiHBG054916.
InParanoidiQ68FW3.
PhylomeDBiQ68FW3.
TreeFamiTF314162.

Miscellaneous databases

PROiQ68FW3.

Gene expression databases

BgeeiENSRNOG00000014002.
ExpressionAtlasiQ68FW3. differential.
GenevisibleiQ68FW3. RN.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR007311. ST7.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PANTHERiPTHR12745. PTHR12745. 1 hit.
PfamiPF04184. ST7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiST7L_RAT
AccessioniPrimary (citable) accession number: Q68FW3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: October 11, 2004
Last modified: November 30, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.