Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Conserved oligomeric Golgi complex subunit 6

Gene

Cog6

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Required for normal Golgi function.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

ReactomeiR-RNO-6807878. COPI-mediated anterograde transport.
R-RNO-6811438. Intra-Golgi traffic.
R-RNO-6811440. Retrograde transport at the Trans-Golgi-Network.

Names & Taxonomyi

Protein namesi
Recommended name:
Conserved oligomeric Golgi complex subunit 6
Short name:
COG complex subunit 6
Alternative name(s):
Component of oligomeric Golgi complex 6
Gene namesi
Name:Cog6
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1303283. Cog6.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 657657Conserved oligomeric Golgi complex subunit 6PRO_0000328218Add
BLAST

Proteomic databases

PaxDbiQ68FP9.
PRIDEiQ68FP9.

Expressioni

Gene expression databases

GenevisibleiQ68FP9. RN.

Interactioni

Subunit structurei

Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000018385.

Family & Domainsi

Sequence similaritiesi

Belongs to the COG6 family.Curated

Phylogenomic databases

eggNOGiKOG3758. Eukaryota.
ENOG410Y72M. LUCA.
GeneTreeiENSGT00390000013518.
HOGENOMiHOG000265767.
HOVERGENiHBG025711.
InParanoidiQ68FP9.
OMAiLFEFTDK.
OrthoDBiEOG7H7927.
PhylomeDBiQ68FP9.
TreeFamiTF314527.

Family and domain databases

InterProiIPR010490. COG6.
[Graphical view]
PANTHERiPTHR21506. PTHR21506. 1 hit.
SMARTiSM01087. COG6. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q68FP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADTSGEVAA VPASGAANGL SNGAGATPAQ PNNPLSRKLH KILETRLEND
60 70 80 90 100
KEMLEALKAL SAFFVENSLR TRRNLRGDIE RRSLAINEEF VSIFKDVKEE
110 120 130 140 150
LESINEDVQA MSSCCQDMTS RLQAAKEQTQ DLIVKTTKLQ AENQRLEIRA
160 170 180 190 200
QVADAFLSKF QLTSDEMTLL RGTRGGPVTE DFFKALGRVK QIHNDVKVLL
210 220 230 240 250
RTNQQTAGLE IMEQMALLQE TAYERLYRWA QSECRALTQE SCDVSAVLTQ
260 270 280 290 300
AMEALQDRPV LYKYTLDEFG TARRSTVVRG FIDALTRGGP GGTPRPIEMH
310 320 330 340 350
SHDPLRYVGD MLAWLHQATA SEKEHLEALL KHVTAQGVKE NIQEVVGHIT
360 370 380 390 400
EGVCRPLKVR IEQVILAEPG AVLLYKISNL LKFYHHTISG IVGNSAATLL
410 420 430 440 450
TTIEEMHLLS KKIFFSSLSL HANKLMDKIE LPPPDLGPSS ALSQTLTLLR
460 470 480 490 500
DVLASHDSSV VPLDARQADF VQVLSCVLDP LLQMCTVSAS NLGTADMATF
510 520 530 540 550
MVNSLYMMKT TLALFEFTDR RLEMLQFQIE AHLDTLINEQ ASYVLTRVGL
560 570 580 590 600
SYIYNTIQQH RPDQGSLASM PNLDSVALKA AMAQFDRYLS APDHLLMPQL
610 620 630 640 650
NSLLSATVKE QIIKQSTELV CRAYGEVHAA VMNPVNAYKD PESILHRSPE

QVKTLLS
Length:657
Mass (Da):72,957
Last modified:October 11, 2004 - v1
Checksum:iC1E839B96B395A3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079442 mRNA. Translation: AAH79442.1.
RefSeqiNP_001004262.1. NM_001004262.1.
UniGeneiRn.105874.

Genome annotation databases

EnsembliENSRNOT00000018385; ENSRNOP00000018385; ENSRNOG00000013660.
GeneIDi310411.
KEGGirno:310411.
UCSCiRGD:1303283. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079442 mRNA. Translation: AAH79442.1.
RefSeqiNP_001004262.1. NM_001004262.1.
UniGeneiRn.105874.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000018385.

Proteomic databases

PaxDbiQ68FP9.
PRIDEiQ68FP9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000018385; ENSRNOP00000018385; ENSRNOG00000013660.
GeneIDi310411.
KEGGirno:310411.
UCSCiRGD:1303283. rat.

Organism-specific databases

CTDi57511.
RGDi1303283. Cog6.

Phylogenomic databases

eggNOGiKOG3758. Eukaryota.
ENOG410Y72M. LUCA.
GeneTreeiENSGT00390000013518.
HOGENOMiHOG000265767.
HOVERGENiHBG025711.
InParanoidiQ68FP9.
OMAiLFEFTDK.
OrthoDBiEOG7H7927.
PhylomeDBiQ68FP9.
TreeFamiTF314527.

Enzyme and pathway databases

ReactomeiR-RNO-6807878. COPI-mediated anterograde transport.
R-RNO-6811438. Intra-Golgi traffic.
R-RNO-6811440. Retrograde transport at the Trans-Golgi-Network.

Miscellaneous databases

PROiQ68FP9.

Gene expression databases

GenevisibleiQ68FP9. RN.

Family and domain databases

InterProiIPR010490. COG6.
[Graphical view]
PANTHERiPTHR21506. PTHR21506. 1 hit.
SMARTiSM01087. COG6. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiCOG6_RAT
AccessioniPrimary (citable) accession number: Q68FP9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: October 11, 2004
Last modified: June 8, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.