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Protein
Submitted name:

Chemokine C motif receptor 1

Gene

XCR1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Chemokine C motif receptor 1Imported
Submitted name:
Chemokine XC receptor 1Imported
Gene namesi
Name:XCR1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:1625. XCR1.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA35037.

PTM / Processingi

Proteomic databases

PaxDbiQ689E2.

Expressioni

Gene expression databases

ExpressionAtlasiQ689E2. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000310405.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IHYH. Eukaryota.
ENOG410XUKS. LUCA.
GeneTreeiENSGT00760000118785.
KOiK04193.

Sequencei

Sequence statusi: Fragment.

Q689E2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30 
MESSGNPEST TFFYYDLQSQ PCENQAWVFA TLATTV
Length:36
Mass (Da):4,064
Last modified:October 11, 2004 - v1
Checksum:iA3E7DBED401C8B0D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei36 – 361Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099782 Genomic DNA. No translation available.
AC133140 Genomic DNA. No translation available.
AB189434 mRNA. Translation: BAD38891.1.
AB189435 mRNA. Translation: BAD38892.1.
RefSeqiNP_001019815.1. NM_001024644.1.
NP_005274.1. NM_005283.2.
UniGeneiHs.248116.

Genome annotation databases

EnsembliENST00000395946; ENSP00000379277; ENSG00000173578.
GeneIDi2829.
KEGGihsa:2829.
UCSCiuc062izi.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099782 Genomic DNA. No translation available.
AC133140 Genomic DNA. No translation available.
AB189434 mRNA. Translation: BAD38891.1.
AB189435 mRNA. Translation: BAD38892.1.
RefSeqiNP_001019815.1. NM_001024644.1.
NP_005274.1. NM_005283.2.
UniGeneiHs.248116.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000310405.

Proteomic databases

PaxDbiQ689E2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000395946; ENSP00000379277; ENSG00000173578.
GeneIDi2829.
KEGGihsa:2829.
UCSCiuc062izi.1. human.

Organism-specific databases

CTDi2829.
HGNCiHGNC:1625. XCR1.
PharmGKBiPA35037.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IHYH. Eukaryota.
ENOG410XUKS. LUCA.
GeneTreeiENSGT00760000118785.
KOiK04193.

Miscellaneous databases

ChiTaRSiXCR1. human.
GenomeRNAii2829.
NextBioi11163.

Gene expression databases

ExpressionAtlasiQ689E2. baseline and differential.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genomic structure of eight porcine chemokine receptors and intergene sharing of an exon between CCR1 and XCR1."
    Shinkai H., Morozumi T., Toki D., Eguchi T., Muneta Y., Awata T., Uenishi H.
    Gene 349:55-66(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: SpleenImported.
  2. "The DNA sequence, annotation and analysis of human chromosome 3."
    Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
    , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
    Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ689E2_HUMAN
AccessioniPrimary (citable) accession number: Q689E2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 11, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.