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Q68978 (Q68978_HHV1) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

UL12 EMBL ABI63474.1
Gene names
Name:AE EMBL AAA45771.1
Synonyms:UL12 EMBL AER37806.1
OrganismHuman herpesvirus 1 (HHV-1) (Human herpes simplex virus 1) EMBL AAA45771.1
Taxonomic identifier10298 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeAlphaherpesvirinaeSimplexvirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length626 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q68978 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: A651D03A29C70260

FASTA62667,470
        10         20         30         40         50         60 
MESTGGPACP PGRTVTKRSW ALAEDTPRGP DSPPKRPRPN SLPLTTTFRP LPPPPQTTSA 

        70         80         90        100        110        120 
VDPSSHSPVN PPRDQHATDT ADEKPRAASP ALSDASGPPT PDIPLSPGGT HARDPDADPD 

       130        140        150        160        170        180 
SPDLDSMWSA SVIPNALPSH ILAETFERHL RGLLRGVRAP LAIGPLWARL DYLCSLAVVL 

       190        200        210        220        230        240 
EEAGMVDRGL GRHLWRLTRR APPAAADAVA PRPLMGFYEA ATQNQADCQL WALLRRGLTT 

       250        260        270        280        290        300 
ASTLRWGPQG PCFSPQWLKH NASLRPDVQS SAVMFGRVNE PTARSLLFRY CVGRADDGGE 

       310        320        330        340        350        360 
AGADTRRFIF HEPSDLAEEN VHTCGVLMDG HTGMVGASLD ILVCPRDIHG YLAPVPKTPL 

       370        380        390        400        410        420 
AFYEVKCRAK YAFDPMDPSD PTASAYEDLM AHRSPEAFRA FIRSIPKPSV RYFAPGRVPG 

       430        440        450        460        470        480 
PEEALVTQDQ AWSEAHASGE KRRCSAADRA LVELNSGVVS EVLLFGAPDL GRHTISPVSW 

       490        500        510        520        530        540 
SSGDLVRREP VFANPRHPNF KQILVQGYVL DSHFPDCPPH PHLVTFIGRH RTSAEEGVTF 

       550        560        570        580        590        600 
RLEDGAGALG AAGPSKASIL PNQAVPIALI ITPVRIDPEI YKAIQRSSRL AFDDTLAELW 

       610        620 
ASRSPGPGPA AAETTSSSPT TGRSSR 

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References

[1]"High-resolution characterization of herpes simplex virus type 1 transcripts encoding alkaline exonuclease and a 50,000-dalton protein tentatively identified as a capsid protein."
Costa R.H., Draper K.G., Banks L., Powell K.L., Cohen G., Eisenberg R., Wagner E.K.
J. Virol. 48:591-603(1983) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Characterization of the genes encoding herpes simplex virus type 1 and type 2 alkaline exonucleases and overlapping proteins."
Draper K.G., Devi-Rao G., Costa R.H., Blair E.D., Thompson R.L., Wagner E.K.
J. Virol. 57:1023-1036(1986) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Determination and analysis of the DNA sequence of highly attenuated herpes simplex virus type 1 mutant HF10, a potential oncolytic virus."
Ushijima Y., Luo C., Goshima F., Yamauchi Y., Kimura H., Nishiyama Y.
Microbes Infect. 9:142-149(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HF EMBL ABI63474.1.
[4]"Multiplex sequencing of seven ocular herpes simplex virus type-1 genomes: phylogeny, sequence variability, and SNP distribution."
Kolb A.W., Adams M., Cabot E.L., Craven M., Brandt C.R.
Invest. Ophthalmol. Vis. Sci. 52:9061-9073(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CJ360 EMBL AER37806.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
K02022 Genomic DNA. Translation: AAA45771.1.
DQ889502 Genomic DNA. Translation: ABI63474.1.
JN420339 Genomic DNA. Translation: AER37806.1.

3D structure databases

ProteinModelPortalQ68978.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.90.320.10. 1 hit.
InterProIPR011604. Exonuc_phg/RecB_C.
IPR001616. Herpes_alk_exo.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PfamPF01771. Herpes_alk_exo. 1 hit.
[Graphical view]
PRINTSPR00924. ALKEXNUCLASE.
SUPFAMSSF52980. SSF52980. 2 hits.
ProtoNetSearch...

Entry information

Entry nameQ68978_HHV1
AccessionPrimary (citable) accession number: Q68978
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 13, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)