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Protein

Replication-associated protein

Gene

C1

Organism
Horseradish curly top virus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Replication-associated proteinUniRule annotation (EC:3.1.21.-UniRule annotation)
Short name:
RepUniRule annotation
Gene namesi
Name:C1Imported
OrganismiHorseradish curly top virusImported
Taxonomic identifieri46448 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeCurtovirus

Subcellular locationi

  • Host nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Interactioni

Subunit structurei

Homooligomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ68543.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 120Gemini_AL1InterPro annotationAdd BLAST113
Domaini124 – 228Gemini_AL1_MInterPro annotationAdd BLAST105

Sequence similaritiesi

Belongs to the geminiviridae Rep protein family.UniRule annotation

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.

Sequencei

Sequence statusi: Complete.

Q68543-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRQPNSFRI QARNIFLTYP QCTIPKDEML QLLQNLNWTV VKPTYIRVAA
60 70 80 90 100
ERHADGTPHL HCLIQLSGKS NIKDCRFFDI THPQRSTSFH PNVQSAKDTN
110 120 130 140 150
AVKNYITKEG DYCESGQYKV SGGTKANKDA VYHNAVNAGG VREALDIIKA
160 170 180 190 200
GDPKTFVTQH HNVKANLEHI FAKPPEPWNP PYPLSSFTNV PEEMQEWADD
210 220 230 240 250
YFGRPVADSH KAKSIIIEGN SRTGKTCWAR ALGTHNYLCG HLDFNMRVYS
260 270 280 290 300
NEVEYNVIDD VAPTYLKMKH WKELIGAQRD WQSNCKYGKP VQIRGGVPTI
310 320 330 340
ILCNPGEGSS FRDFLDKPEN DGLRQWTLYN AIFIFLDTPL FDNGIH
Length:346
Mass (Da):39,336
Last modified:November 1, 1996 - v1
Checksum:i3F0D17D4B5548501
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U49907 Genomic DNA. Translation: AAB18926.1.
RefSeqiNP_066185.1. NC_002543.1.

Genome annotation databases

GeneIDi911820.
KEGGivg:911820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U49907 Genomic DNA. Translation: AAB18926.1.
RefSeqiNP_066185.1. NC_002543.1.

3D structure databases

ProteinModelPortaliQ68543.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi911820.
KEGGivg:911820.

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.
ProtoNetiSearch...

Entry informationi

Entry nameiQ68543_9GEMI
AccessioniPrimary (citable) accession number: Q68543
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.