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Q683N8

- Q683N8_RAT

UniProt

Q683N8 - Q683N8_RAT

Protein
Submitted name:

Aryl hydrocarbon receptor

Gene

Ahr

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. signal transducer activity Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Molecular functioni

    ReceptorImported

    Keywords - Biological processi

    Transcription, Transcription regulationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Aryl hydrocarbon receptorImported
    Gene namesi
    Name:AhrImported
    Synonyms:ahRImported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi2074. Ahr.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-KW

    Keywords - Cellular componenti

    NucleusSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ683N8.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000006618.

    Structurei

    3D structure databases

    ProteinModelPortaliQ683N8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 basic helix-loop-helix (bHLH) domain.UniRule annotation
    Contains bHLH (basic helix-loop-helix) domain.SAAS annotation

    Phylogenomic databases

    HOVERGENiHBG007313.
    InParanoidiQ683N8.

    Family and domain databases

    Gene3Di4.10.280.10. 1 hit.
    InterProiIPR011598. bHLH_dom.
    IPR001610. PAC.
    IPR000014. PAS.
    IPR013767. PAS_fold.
    IPR013655. PAS_fold_3.
    [Graphical view]
    PfamiPF00010. HLH. 1 hit.
    PF00989. PAS. 1 hit.
    PF08447. PAS_3. 1 hit.
    [Graphical view]
    SMARTiSM00353. HLH. 1 hit.
    SM00086. PAC. 1 hit.
    SM00091. PAS. 2 hits.
    [Graphical view]
    SUPFAMiSSF47459. SSF47459. 1 hit.
    SSF55785. SSF55785. 2 hits.
    PROSITEiPS50888. BHLH. 1 hit.
    PS50112. PAS. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q683N8-1 [UniParc]FASTAAdd to Basket

    « Hide

    ASRKRRKPVQ KTVKPVPAEG IKSNPSKRHR DRLNTELDRL ASLLPFPQDV    50
    INKLDKLSVL RLSVSYLRAK SFFDVALKST PADRSRGQDQ CRAQVRDWQD 100
    LQEGEFLLQA LNGFVLVVTA DALVFYASST IQDYLGFQQS DVIHQSVYEL 150
    IHTEDRAEFQ RQLHWALNPS QCTDSAQGVD ETHGLPQPAV YYTPDQLPPE 200
    NTAFMERCFR CRLRCLLDNS SGFLAMNFQG RLKYLHGQNK KGKDGALLPP 250
    QLALFAIATP LQPPSILEIR TKNFIFRTKH KLDFTPIGCD AKGQLILGYT 300
    EVELCNKGSG YQFIHAADML HCAESHIRMI KTGESGMTVF RLLAKHSRWR 350
    WVQSNARLIY RNGRPDYIIA TQRPLTDEEG REHLQKRSMT LPFMFATGEA 400
    VLYEISSPFS PIMDPLPIRT KSNTSRKDWA PQSTPSKDSF HPNSLMSALI 450
    QQDESIYLCP PSSPAPLDSH FLMDSMSECG SWQGSFAVAS NEALLKHEEI 500
    RHTQDVNLTL SGGPSELFPD NKNNDLYSIM RNLGIDFEDI RSMQNEEFFR 550
    TDSSGEVDFK DIDITDEILT YVQDSLNNST LLNSACQQQP VSQHLSCMLQ 600
    ERLQLEQQQQ LQQQHPTQTL EPQRQLCQVE VPQHELGQKT KHMQVNGMFA 650
    SWNPAPPVSF SCPQQERKHY SLFSGLQGTA QEFPYKSEVD SMPYTQNFAP 700
    CNQSLLPEHS KGTQLDFPGR DFERSLHPNA SNLEDFVSCL QVPENQRHGI 750
    NSQSAMVSPQ AYYAGAMSMY QCQAGPQHTP VDQMQYSPEI PGSQAFLSKF 800
    QSPSILNEAY SADLSSIGHL QTAAHLPRLA EAQPLPDITP SGFL 844
    Length:844
    Mass (Da):95,302
    Last modified:October 11, 2004 - v1
    Checksum:i29CF96AD950FB5A7
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ821851 mRNA. Translation: CAH25391.1.
    UniGeneiRn.91370.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ821851 mRNA. Translation: CAH25391.1 .
    UniGenei Rn.91370.

    3D structure databases

    ProteinModelPortali Q683N8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000006618.

    Chemistry

    BindingDBi Q683N8.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    RGDi 2074. Ahr.

    Phylogenomic databases

    HOVERGENi HBG007313.
    InParanoidi Q683N8.

    Gene expression databases

    Genevestigatori Q683N8.

    Family and domain databases

    Gene3Di 4.10.280.10. 1 hit.
    InterProi IPR011598. bHLH_dom.
    IPR001610. PAC.
    IPR000014. PAS.
    IPR013767. PAS_fold.
    IPR013655. PAS_fold_3.
    [Graphical view ]
    Pfami PF00010. HLH. 1 hit.
    PF00989. PAS. 1 hit.
    PF08447. PAS_3. 1 hit.
    [Graphical view ]
    SMARTi SM00353. HLH. 1 hit.
    SM00086. PAC. 1 hit.
    SM00091. PAS. 2 hits.
    [Graphical view ]
    SUPFAMi SSF47459. SSF47459. 1 hit.
    SSF55785. SSF55785. 2 hits.
    PROSITEi PS50888. BHLH. 1 hit.
    PS50112. PAS. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Risk Assessment of dietary dioxins."
      Fan M., Bell D.R.
      Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Crl:Imported.
      Tissue: LiverImported.

    Entry informationi

    Entry nameiQ683N8_RAT
    AccessioniPrimary (citable) accession number: Q683N8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2004
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)