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Protein
Submitted name:

Aryl hydrocarbon receptor

Gene

Ahr

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Aryl hydrocarbon receptorImported
Gene namesi
Name:AhrImported
Synonyms:ahRImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi2074. Ahr.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006618.

Structurei

3D structure databases

ProteinModelPortaliQ683N8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 basic helix-loop-helix (bHLH) domain.UniRule annotation
Contains bHLH (basic helix-loop-helix) domain.SAAS annotation

Phylogenomic databases

HOVERGENiHBG007313.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 2 hits.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q683N8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ASRKRRKPVQ KTVKPVPAEG IKSNPSKRHR DRLNTELDRL ASLLPFPQDV
60 70 80 90 100
INKLDKLSVL RLSVSYLRAK SFFDVALKST PADRSRGQDQ CRAQVRDWQD
110 120 130 140 150
LQEGEFLLQA LNGFVLVVTA DALVFYASST IQDYLGFQQS DVIHQSVYEL
160 170 180 190 200
IHTEDRAEFQ RQLHWALNPS QCTDSAQGVD ETHGLPQPAV YYTPDQLPPE
210 220 230 240 250
NTAFMERCFR CRLRCLLDNS SGFLAMNFQG RLKYLHGQNK KGKDGALLPP
260 270 280 290 300
QLALFAIATP LQPPSILEIR TKNFIFRTKH KLDFTPIGCD AKGQLILGYT
310 320 330 340 350
EVELCNKGSG YQFIHAADML HCAESHIRMI KTGESGMTVF RLLAKHSRWR
360 370 380 390 400
WVQSNARLIY RNGRPDYIIA TQRPLTDEEG REHLQKRSMT LPFMFATGEA
410 420 430 440 450
VLYEISSPFS PIMDPLPIRT KSNTSRKDWA PQSTPSKDSF HPNSLMSALI
460 470 480 490 500
QQDESIYLCP PSSPAPLDSH FLMDSMSECG SWQGSFAVAS NEALLKHEEI
510 520 530 540 550
RHTQDVNLTL SGGPSELFPD NKNNDLYSIM RNLGIDFEDI RSMQNEEFFR
560 570 580 590 600
TDSSGEVDFK DIDITDEILT YVQDSLNNST LLNSACQQQP VSQHLSCMLQ
610 620 630 640 650
ERLQLEQQQQ LQQQHPTQTL EPQRQLCQVE VPQHELGQKT KHMQVNGMFA
660 670 680 690 700
SWNPAPPVSF SCPQQERKHY SLFSGLQGTA QEFPYKSEVD SMPYTQNFAP
710 720 730 740 750
CNQSLLPEHS KGTQLDFPGR DFERSLHPNA SNLEDFVSCL QVPENQRHGI
760 770 780 790 800
NSQSAMVSPQ AYYAGAMSMY QCQAGPQHTP VDQMQYSPEI PGSQAFLSKF
810 820 830 840
QSPSILNEAY SADLSSIGHL QTAAHLPRLA EAQPLPDITP SGFL
Length:844
Mass (Da):95,302
Last modified:October 11, 2004 - v1
Checksum:i29CF96AD950FB5A7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ821851 mRNA. Translation: CAH25391.1.
UniGeneiRn.91370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ821851 mRNA. Translation: CAH25391.1.
UniGeneiRn.91370.

3D structure databases

ProteinModelPortaliQ683N8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006618.

Chemistry

BindingDBiQ683N8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi2074. Ahr.

Phylogenomic databases

HOVERGENiHBG007313.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 2 hits.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Risk Assessment of dietary dioxins."
    Fan M., Bell D.R.
    Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Crl:Imported.
    Tissue: LiverImported.

Entry informationi

Entry nameiQ683N8_RAT
AccessioniPrimary (citable) accession number: Q683N8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: June 24, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.