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Q682B4

- BGL06_ARATH

UniProt

Q682B4 - BGL06_ARATH

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Protein

Putative beta-glucosidase 6

Gene

BGLU6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei43 – 431SubstrateBy similarity
Binding sitei141 – 1411SubstrateBy similarity
Binding sitei186 – 1861SubstrateBy similarity
Active sitei187 – 1871Proton donorBy similarity
Binding sitei329 – 3291SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT1G60270-MONOMER.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative beta-glucosidase 6 (EC:3.2.1.21)
Short name:
AtBGLU6
Gene namesi
Name:BGLU6
Ordered Locus Names:At1g60270
ORF Names:T13D8.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G60270.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence AnalysisAdd
BLAST
Chaini21 – 379359Putative beta-glucosidase 6PRO_0000389568Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi206 ↔ 213By similarity
Glycosylationi217 – 2171N-linked (GlcNAc...)Sequence Analysis
Glycosylationi362 – 3621N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Expressioni

Gene expression databases

GenevestigatoriQ682B4.

Structurei

3D structure databases

ProteinModelPortaliQ682B4.
SMRiQ682B4. Positions 24-379.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000088630.
InParanoidiQ682B4.
OMAiWTTINEG.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q682B4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEKTFALITI FLAFAFSGKC SDVFSRCDFP EGFVFGSSTS AYQWEGAVAE
60 70 80 90 100
DGRKPSVWDR FCHSHNNQGN GDITCDGYHK YKEDVKLMVD TNLDAFRFSI
110 120 130 140 150
SWSRLIPNRR GPVNQKGLQF YKNLIQELVN HGIEPYVTLH HFDHPQYLED
160 170 180 190 200
EYEGWLNHMI VEDFTAYADV CFREFGNHVK FWTTINEGNI FSIGGYNDGD
210 220 230 240 250
SPPGRCSIPG QNCLLGNSST EPYIVGHNLL LAHASVSRLY KQNYKDKQGG
260 270 280 290 300
SIGFSILTIG FSPSTSSKDD AIATQRANDF FNGWMLGPLI YGDYPDTMKR
310 320 330 340 350
IVGSRMPVFS EEESEQVKGS SDYIGINHYL AASITNSKLK PSISGNPDFY
360 370
SDMNVILSFF ANFSSSEYDV APWAIEAVL
Length:379
Mass (Da):42,587
Last modified:October 11, 2004 - v1
Checksum:iE2DA1D1B779B0D70
GO

Sequence cautioni

The sequence AAC24060.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004473 Genomic DNA. Translation: AAC24060.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33672.1.
AK175453 mRNA. Translation: BAD43216.1.
PIRiT02279.
RefSeqiNP_176233.2. NM_104717.2.
UniGeneiAt.49989.

Genome annotation databases

EnsemblPlantsiAT1G60270.1; AT1G60270.1; AT1G60270.
GeneIDi3767579.
KEGGiath:AT1G60270.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004473 Genomic DNA. Translation: AAC24060.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE33672.1 .
AK175453 mRNA. Translation: BAD43216.1 .
PIRi T02279.
RefSeqi NP_176233.2. NM_104717.2.
UniGenei At.49989.

3D structure databases

ProteinModelPortali Q682B4.
SMRi Q682B4. Positions 24-379.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G60270.1 ; AT1G60270.1 ; AT1G60270 .
GeneIDi 3767579.
KEGGi ath:AT1G60270.

Organism-specific databases

TAIRi AT1G60270.

Phylogenomic databases

HOGENOMi HOG000088630.
InParanoidi Q682B4.
OMAi WTTINEG.

Enzyme and pathway databases

BioCyci ARA:AT1G60270-MONOMER.

Gene expression databases

Genevestigatori Q682B4.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL06_ARATH
AccessioniPrimary (citable) accession number: Q682B4
Secondary accession number(s): O80750
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: October 11, 2004
Last modified: October 29, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3