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Q682B4 (BGL06_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative beta-glucosidase 6

Short name=AtBGLU6
EC=3.2.1.21
Gene names
Name:BGLU6
Ordered Locus Names:At1g60270
ORF Names:T13D8.16
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceUncertain

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Caution

Could be the product of a pseudogene.

Sequence caution

The sequence AAC24060.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Chain21 – 379359Putative beta-glucosidase 6
PRO_0000389568

Sites

Active site1871Proton donor By similarity
Binding site431Substrate By similarity
Binding site1411Substrate By similarity
Binding site1861Substrate By similarity
Binding site3291Substrate By similarity

Amino acid modifications

Glycosylation2171N-linked (GlcNAc...) Potential
Glycosylation3621N-linked (GlcNAc...) Potential
Disulfide bond206 ↔ 213 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q682B4 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: E2DA1D1B779B0D70

FASTA37942,587
        10         20         30         40         50         60 
MEKTFALITI FLAFAFSGKC SDVFSRCDFP EGFVFGSSTS AYQWEGAVAE DGRKPSVWDR 

        70         80         90        100        110        120 
FCHSHNNQGN GDITCDGYHK YKEDVKLMVD TNLDAFRFSI SWSRLIPNRR GPVNQKGLQF 

       130        140        150        160        170        180 
YKNLIQELVN HGIEPYVTLH HFDHPQYLED EYEGWLNHMI VEDFTAYADV CFREFGNHVK 

       190        200        210        220        230        240 
FWTTINEGNI FSIGGYNDGD SPPGRCSIPG QNCLLGNSST EPYIVGHNLL LAHASVSRLY 

       250        260        270        280        290        300 
KQNYKDKQGG SIGFSILTIG FSPSTSSKDD AIATQRANDF FNGWMLGPLI YGDYPDTMKR 

       310        320        330        340        350        360 
IVGSRMPVFS EEESEQVKGS SDYIGINHYL AASITNSKLK PSISGNPDFY SDMNVILSFF 

       370 
ANFSSSEYDV APWAIEAVL 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. expand/collapse author list , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1."
Xu Z., Escamilla-Trevino L.L., Zeng L., Lalgondar M., Bevan D.R., Winkel B.S.J., Mohamed A., Cheng C.-L., Shih M.-C., Poulton J.E., Esen A.
Plant Mol. Biol. 55:343-367(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC004473 Genomic DNA. Translation: AAC24060.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33672.1.
AK175453 mRNA. Translation: BAD43216.1.
PIRT02279.
RefSeqNP_176233.2. NM_104717.2.
UniGeneAt.49989.

3D structure databases

ProteinModelPortalQ682B4.
SMRQ682B4. Positions 24-379.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G60270.1; AT1G60270.1; AT1G60270.
GeneID3767579.
KEGGath:AT1G60270.

Organism-specific databases

TAIRAT1G60270.

Phylogenomic databases

HOGENOMHOG000088630.
OMAWTTINEG.

Enzyme and pathway databases

BioCycARA:AT1G60270-MONOMER.

Gene expression databases

GenevestigatorQ682B4.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL06_ARATH
AccessionPrimary (citable) accession number: Q682B4
Secondary accession number(s): O80750
Entry history
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: October 11, 2004
Last modified: February 19, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names