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Q67UP9

- P2C58_ORYSJ

UniProt

Q67UP9 - P2C58_ORYSJ

Protein

Probable protein phosphatase 2C 58

Gene

Os06g0651600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi57 – 571Manganese 1By similarity
    Metal bindingi57 – 571Manganese 2By similarity
    Metal bindingi58 – 581Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi272 – 2721Manganese 2By similarity
    Metal bindingi320 – 3201Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein serine/threonine phosphatase activity Source: InterPro

    GO - Biological processi

    1. protein dephosphorylation Source: InterPro

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 58 (EC:3.1.3.16)
    Short name:
    OsPP2C58
    Gene namesi
    Ordered Locus Names:Os06g0651600, LOC_Os06g44210
    ORF Names:P0453H04.39-1, P0453H04.39-2
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiQ67UP9.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 368368Probable protein phosphatase 2C 58PRO_0000363305Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ67UP9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini22 – 322301PP2C-likeAdd
    BLAST

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000233896.
    KOiK17499.
    OMAiTEDCCND.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 2 hits.
    [Graphical view]
    SMARTiSM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 2 hits.
    PROSITEiPS01032. PP2C. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q67UP9-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MGVYLSTPKT EKLSEDGEND KLKFGLSSMQ GWRATMEDAH SALLDIDNDT    50
    SFFGVFDGHG GRVVAKFCAK YLHREVLRSE AYSAGDLGNA AHKAFFRMDE 100
    MMRGQRGWRE LQALGDKINQ ISGMIEGLIW SPRGSDSNDQ HDDWAFEEGP 150
    HSDFAGPTCG STACVAIVRN SQLVVANAGD SRCVISRNGQ AYNLSRDHKP 200
    ELEAERERIL KAGGYIQMGR VNGTINLSRA IGDIEFKQNK FLSPDKQMLT 250
    ANPDINTVEL CDDDDFLVLA CDGIWDCMSS QQLVDFIHEH INTESSLSAV 300
    CERVLDRCLA PSTLGGEGCD NMTMILVQFK KPISQNKNVS PAEQSAADKQ 350
    PTGDTHWSEI HVTEESSS 368
    Length:368
    Mass (Da):40,591
    Last modified:October 11, 2004 - v1
    Checksum:i2ED54855F9A80D5C
    GO
    Isoform 2 (identifier: Q67UP9-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         276-368: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:275
    Mass (Da):30,432
    Checksum:iB278EA19D727FAD6
    GO

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei276 – 36893Missing in isoform 2. 1 PublicationVSP_036276Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005453 Genomic DNA. Translation: BAD38120.1.
    AP005453 Genomic DNA. Translation: BAD38121.1.
    AP008212 Genomic DNA. Translation: BAF20143.1.
    AK112023 mRNA. Translation: BAG99518.1.
    AK120711 mRNA. Translation: BAH00138.1.
    RefSeqiNP_001058229.1. NM_001064764.1. [Q67UP9-1]
    UniGeneiOs.46083.

    Genome annotation databases

    EnsemblPlantsiOS06T0651600-01; OS06T0651600-01; OS06G0651600. [Q67UP9-1]
    GeneIDi4341693.
    KEGGiosa:4341693.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005453 Genomic DNA. Translation: BAD38120.1 .
    AP005453 Genomic DNA. Translation: BAD38121.1 .
    AP008212 Genomic DNA. Translation: BAF20143.1 .
    AK112023 mRNA. Translation: BAG99518.1 .
    AK120711 mRNA. Translation: BAH00138.1 .
    RefSeqi NP_001058229.1. NM_001064764.1. [Q67UP9-1 ]
    UniGenei Os.46083.

    3D structure databases

    ProteinModelPortali Q67UP9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS06T0651600-01 ; OS06T0651600-01 ; OS06G0651600 . [Q67UP9-1 ]
    GeneIDi 4341693.
    KEGGi osa:4341693.

    Organism-specific databases

    Gramenei Q67UP9.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000233896.
    KOi K17499.
    OMAi TEDCCND.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 2 hits.
    [Graphical view ]
    SMARTi SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 2 hits.
    PROSITEi PS01032. PP2C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
      Strain: cv. Nipponbare.
    4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C58_ORYSJ
    AccessioniPrimary (citable) accession number: Q67UP9
    Secondary accession number(s): Q67UP8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3