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Protein
Submitted name:

BHLH transcription factor

Gene

Os02g0433600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
BHLH transcription factorImported
Submitted name:
Basic helix-loop-helix-like proteinImported
Submitted name:
Os02g0433600 proteinImported
Submitted name:
cDNA clone:001-017-H10, full insert sequenceImported
Submitted name:
cDNA clone:J023031O20, full insert sequenceImported
Gene namesi
Ordered Locus Names:Os02g0433600Imported
ORF Names:OsJ_06533Imported, OSJNBa0065F08.2Imported, OSNPB_020433600Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g23823.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 89BHLHInterPro annotationAdd BLAST51

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili79 – 134Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IVNY. Eukaryota.
ENOG4111V2W. LUCA.
OMAiSNRSHSM.
OrthoDBiEOG09360IBT.

Family and domain databases

CDDicd00083. HLH. 1 hit.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR036638. HLH_DNA-bd_sf.
PfamiView protein in Pfam
PF00010. HLH. 1 hit.
SMARTiView protein in SMART
SM00353. HLH. 1 hit.
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.

Sequencei

Sequence statusi: Complete.

Q67U21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPRSSQAQE DGFFHPRDGA CPADSSGKTE CKTQGSIATR KVQKADREKM
60 70 80 90 100
RRDRLNEQFQ ELGSTLDPDR PRNDKATILS DAIQMLKDLT SQVNKLKAEY
110 120 130 140 150
TSLSEEAREL TQEKNELRDE KVSLKFEVDN LNTQYQQRMR VLYPWTGMEP
160 170 180 190 200
SVVIGPPLPY PFSVPVPVPV PIPSGAVPMH PQLQAYPYFR NQTSGTVSNP
210 220 230 240 250
CTPYMAYTQP IHPPTDQLSN QFSAPVQHSS SNRSHSMAQD SRSKSSALQQ
260 270 280 290 300
VSCRGKHDDF DDVATDLELK TPGSSAPLQS EIANKDSSSD LKKKQQFIQE
310 320 330 340
TKGSSLTEGS SSSSRCSSSG PPDVSNSIEG GSVADDQRST VQT
Length:343
Mass (Da):37,815
Last modified:October 11, 2004 - v1
Checksum:i6224488FD5184A36
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei343Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HQ858850 mRNA. Translation: ADX60262.1.
AP005770 Genomic DNA. Translation: BAD38350.1.
AP008208 Genomic DNA. Translation: BAF08644.1.
AK069790 mRNA. Translation: BAG91606.1.
AK103986 mRNA. Translation: BAG96359.1.
AP014958 Genomic DNA. Translation: BAS78448.1.
CM000139 Genomic DNA. Translation: EEE56885.1.
RefSeqiXP_015626280.1. XM_015770794.1.
UniGeneiOs.52897.

Genome annotation databases

EnsemblPlantsiOS02T0433600-01; OS02T0433600-01; OS02G0433600.
GeneIDi4329217.
GrameneiOS02T0433600-01; OS02T0433600-01; OS02G0433600.

Similar proteinsi

Entry informationi

Entry nameiQ67U21_ORYSJ
AccessioniPrimary (citable) accession number: Q67U21
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: October 25, 2017
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported