Q67RU2 (Q67RU2_SYMTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL BAD39601.1

Gene names

Ordered Locus Names:

STH616

Organism

Symbiobacterium thermophilum (strain T / IAM 14863) [Complete proteome] [HAMAP]

Taxonomic identifier

292459 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiales incertae sedis › Clostridiales Family XVIII. Incertae Sedis › Symbiobacterium › Symbiobacterium thermophilum

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAD39601.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q67RU2 [UniParc]. Last modified October 11, 2004. Version 1. Checksum: BB5EE75AD7914CE5	FASTA	457	49,441
	10 20 30 40 50 60 MTQTTRYVRL VTEVPGPRSR ELMARKERVV ANALSIHVPV AIQEARGALV TDVDGNVFID 70 80 90 100 110 120 LAGGMGCMNV GHSHPRVVEA IQRSAAQFTH TDFSVIMYES YIRLAERLAA LAPGDFPKKA 130 140 150 160 170 180 CFFNSGAEAV ENAIKIARKY TGRRAIIALE GAFHGRTNLA MALTSKVKPY KEGFGPFAPE 190 200 210 220 230 240 IYRVPTPYTY RRPAGMSEAE YVRFCADALE RALITHVSPD EVAAIILEPV QGEGGFIPLH 250 260 270 280 290 300 PDYLARVSQL ARKHGFLIIA DEIQSGFGRT GTFFASEQLG LVPDLICVGK SLAAGMPLSG 310 320 330 340 350 360 VIGRAEVMDA PEDSTIGGTY VGNPVACDAA HAVLDIMEEE GLVSRARAIG DLMRRRFQEL 370 380 390 400 410 420 AVQLESIPGS RLQIGEIRGL GAMLGVELVT DRATRAPATA EAAEVVKRAW QRGVVVVKCG 430 440 450 IYGNTLRMLL PLVITDDQLN EALDIIGQIC TEIARGE

References

[1]

"Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism." Ueda K., Yamashita A., Ishikawa J., Shimada M., Watsuji T., Morimura K., Ikeda H., Hattori M., Beppu T. Nucleic Acids Res. 32:4937-4944(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T / IAM 14863.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006840 Genomic DNA. Translation: BAD39601.1.
RefSeq	YP_074445.1. NC_006177.1.
3D structure databases
ProteinModelPortal	Q67RU2.
ModBase	Search...
Protein-protein interaction databases
STRING	292459.STH616.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAD39601; BAD39601; STH616.
GeneID	2981665.
KEGG	sth:STH616.
PATRIC	23779308. VBISymThe116959_0599.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K07250.
OMA	RTIAYLE.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q67RU2_SYMTH

Accession

Primary (citable) accession number: Q67RU2

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2004
Last sequence update:	October 11, 2004
Last modified:	May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)