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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

STH1083

Organism
Symbiobacterium thermophilum (strain T / IAM 14863)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSTHE292459:GJMM-1144-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:STH1083Imported
OrganismiSymbiobacterium thermophilum (strain T / IAM 14863)Imported
Taxonomic identifieri292459 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSymbiobacteriaceaeSymbiobacterium
ProteomesiUP000000417 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei22 – 4625HelicalSequence analysisAdd
BLAST
Transmembranei199 – 22022HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292459.STH1083.

Structurei

3D structure databases

ProteinModelPortaliQ67QH5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini221 – 27454HAMPInterPro annotationAdd
BLAST
Domaini321 – 578258Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili518 – 55235Sequence analysisAdd
BLAST
Coiled coili577 – 63559Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiCOG0840. LUCA.
ENOG4105C8Q. Bacteria.
HOGENOMiHOG000148080.
OMAiHTIALLP.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q67QH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAATFTGGV SMQTHLRTRA SIFAKVLFAL FVVILLLCTV GIWSYLSMED
60 70 80 90 100
VISSVTTIER RETLVDGSRE IKADLLLQLA YIRDFIIFAD EQALDSLEAA
110 120 130 140 150
SADLMATLDR MIATANVEET RNQFRSIQAT QVEYDAILQQ VESLVRRGDR
160 170 180 190 200
EQAAAVLRDE AYPKMNDMLD VADAIIVKVS RNAAETRNTV RADAARMQIG
210 220 230 240 250
LLVTMAVGLV AGVVIAVVAA RAITQRIQRL AEAATRMAGG DLSLSELPVN
260 270 280 290 300
SGDEVGRTVE AFNTMLRNLR AMVRDIGAAS ETVMSASEQL SAAADQAARA
310 320 330 340 350
AAGSSQAITQ VAAGSSEQAT STAQTNQLVE QLRGAIQQIA ASSRGSAVEV
360 370 380 390 400
QEAATRQVRM AEELQRMSAS AAGTAQVALQ TEQRARAAAA VVERALREIE
410 420 430 440 450
QVGAVVGTSA DRIQELDRLS EQVGSITDVI SSIADQTNLL ALNAAIEAAR
460 470 480 490 500
AGEHGRGFAV VADEVRKLAE QSAASAREIA DLISNIQTGT AEAVRAMSQG
510 520 530 540 550
TERLAATNQL AAEAGSALEE ILGAVQQAAE EAQRIAEKAR QAKERAAAAM
560 570 580 590 600
RTFNAVAAMT EENTAMSEEM DAGAAEVASA VNRIARLSEE NAAAAEQVSA
610 620 630
SVEELTASAE QVASSARELR QTAAELQARV RRFRL
Length:635
Mass (Da):67,333
Last modified:October 11, 2004 - v1
Checksum:iB2FD11119E64A71B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006840 Genomic DNA. Translation: BAD40068.1.

Genome annotation databases

EnsemblBacteriaiBAD40068; BAD40068; STH1083.
KEGGisth:STH1083.
PATRICi23780310. VBISymThe116959_1084.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006840 Genomic DNA. Translation: BAD40068.1.

3D structure databases

ProteinModelPortaliQ67QH5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292459.STH1083.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD40068; BAD40068; STH1083.
KEGGisth:STH1083.
PATRICi23780310. VBISymThe116959_1084.

Phylogenomic databases

eggNOGiCOG0840. LUCA.
ENOG4105C8Q. Bacteria.
HOGENOMiHOG000148080.
OMAiHTIALLP.

Enzyme and pathway databases

BioCyciSTHE292459:GJMM-1144-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism."
    Ueda K., Yamashita A., Ishikawa J., Shimada M., Watsuji T., Morimura K., Ikeda H., Hattori M., Beppu T.
    Nucleic Acids Res. 32:4937-4944(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: T / IAM 14863Imported.

Entry informationi

Entry nameiQ67QH5_SYMTH
AccessioniPrimary (citable) accession number: Q67QH5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: January 20, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.