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Q67BS9

- P19_HARV

UniProt

Q67BS9 - P19_HARV

Protein

RNA silencing suppressor p19

Gene

ORF4

Organism
Havel river virus (HaRV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA By similarity.By similarity

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Suppressor of RNA silencing

    Keywords - Ligandi

    RNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    RNA silencing suppressor p19
    Alternative name(s):
    19 kDa symptom severity modulator
    Gene namesi
    ORF Names:ORF4
    OrganismiHavel river virus (HaRV)
    Taxonomic identifieri254711 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeTombusvirus

    Subcellular locationi

    GO - Cellular componenti

    1. virion Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 172172RNA silencing suppressor p19PRO_0000222875Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliQ67BS9.
    SMRiQ67BS9. Positions 9-152.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the tombusvirus protein p19 family.Curated

    Family and domain databases

    InterProiIPR004905. Tombusvirus_p19.
    [Graphical view]
    PfamiPF03220. Tombus_P19. 1 hit.
    [Graphical view]
    ProDomiPD005743. Tombus_P19. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF103145. SSF103145. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q67BS9-1 [UniParc]FASTAAdd to Basket

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    MEGAIQGSDA REQANSERWD GGCGGTITPF KLPDESPGLH EWRLHNSEES    50
    EDKDHPLGFK ESWGFGKVVF KRYLRYDGTE ASLHRALGSW ERGSVNDAAS 100
    RFLGLGQVGC TYSIRFRGSC LTLSGGSRTL QRLIEMAIRT KRTMLQLTPS 150
    EVEGNVSRGR PEGAKAFEKE SE 172
    Length:172
    Mass (Da):19,082
    Last modified:October 11, 2004 - v1
    Checksum:i3CD8A5EE4E6D7387
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY370535 Genomic RNA. Translation: AAR28057.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY370535 Genomic RNA. Translation: AAR28057.1 .

    3D structure databases

    ProteinModelPortali Q67BS9.
    SMRi Q67BS9. Positions 9-152.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR004905. Tombusvirus_p19.
    [Graphical view ]
    Pfami PF03220. Tombus_P19. 1 hit.
    [Graphical view ]
    ProDomi PD005743. Tombus_P19. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF103145. SSF103145. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Isolation of two strains of a new tombusvirus (Havel river virus, HaRV) from surface waters in Germany."
      Koenig R., Pfeilstetter E., Kegler H., Lesemann D.E.
      Eur. J. Plant Pathol. 110:429-433(2004)
      [AGRICOLA] [Europe PMC]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
      Strain: S.

    Entry informationi

    Entry nameiP19_HARV
    AccessioniPrimary (citable) accession number: Q67BS9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 15, 2005
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3