Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Digitaria streak virus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds the genomic viral ssDNA and shuttles it into and out of the cell nucleus.UniRule annotation
Encapsidates the viral genome into characteristic twinned ('geminate') particles. Plays a role in protection of the genome from degradation, virus acquisition and transmission by insect vectors, infectivity, and systemic movement. The CP of monopartite geminiviruses is absolutely essential for virus movement.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Viral penetration into host nucleusUniRule annotation, Virus entry into host cell

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiDigitaria streak virusImported
Taxonomic identifieri10837 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeMastrevirus

Subcellular locationi

  • Host nucleus UniRule annotation
  • Virion UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Host nucleusUniRule annotation, T=1 icosahedral capsid proteinUniRule annotation, Virion

Interactioni

Subunit structurei

Homomultimer. Interacts with the movement protein. Binds to single-stranded and double-stranded viral DNA.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the geminiviridae capsid protein family.UniRule annotation

Family and domain databases

InterProiIPR000143. Gemcoat_MSV.
IPR000263. GV_A/BR1_coat.
[Graphical view]
PfamiPF00844. Gemini_coat. 1 hit.
[Graphical view]
PRINTSiPR00223. GEMCOATARBR1.
PR00226. GEMCOATMSV.

Sequencei

Sequence statusi: Complete.

Q67566-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSMKRKRT DEGSGSRRFT KKKSAAKGRT SSSRAIRPAL QIQSFVSAGA
60 70 80 90 100
ATIAVPTGGV CHLLSSYSRG SGEGDRHTNE TVTYKAAFDY HFSANAGPCA
110 120 130 140 150
YSSIGVGVLW LVYDAQPSGQ VPAVTDIFPH DTTLQSFPYT WKVGREVCHR
160 170 180 190 200
FVVKRRWCFT METNGRIGSD KPPSNAVWPP CKRSIYFHKF ATGLGVKTEW
210 220 230 240
KNTTDGGVGS IKKGALYFVI APGSGIDFTL FGTCRMYFKS VGNQ
Length:244
Mass (Da):26,606
Last modified:November 1, 1996 - v1
Checksum:i8578D9C7134D22D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M23022 Genomic DNA. Translation: AAA42970.1.
RefSeqiNP_040963.1. NC_001478.1.

Genome annotation databases

GeneIDi1489650.
KEGGivg:1489650.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M23022 Genomic DNA. Translation: AAA42970.1.
RefSeqiNP_040963.1. NC_001478.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1489650.
KEGGivg:1489650.

Family and domain databases

InterProiIPR000143. Gemcoat_MSV.
IPR000263. GV_A/BR1_coat.
[Graphical view]
PfamiPF00844. Gemini_coat. 1 hit.
[Graphical view]
PRINTSiPR00223. GEMCOATARBR1.
PR00226. GEMCOATMSV.
ProtoNetiSearch...

Publicationsi

  1. "The nucleotide sequence of a geminivirus from Digitaria sanguinalis."
    Donson J., Accotto G.P., Boulton M.I., Mullineaux P.M., Davies J.W.
    Virology 161:160-169(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ67566_9GEMI
AccessioniPrimary (citable) accession number: Q67566
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.