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Q672I0

- VP3_SVSAP

UniProt

Q672I0 - VP3_SVSAP

Protein

Uncharacterized protein VP3

Gene

ORF3

Organism
Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
    • BLAST
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein VP3
    Gene namesi
    ORF Names:ORF3
    OrganismiSapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
    Taxonomic identifieri291175 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]
    ProteomesiUP000007049: Genome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 161161Uncharacterized protein VP3PRO_0000342116Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the sapovirus VP3 family.Curated

    Family and domain databases

    InterProiIPR009949. Sapovirus_VP3.
    [Graphical view]
    PfamiPF07349. DUF1478. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative initiation. Align

    Isoform Uncharacterized protein VP3 (identifier: Q672I0-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

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    MAPTQSQSRA TTRWSLTRLA QQVRPHPTLL LLIRSNPMGP HSAWSWLLPL    50
    VQSNPMSLRQ YATALQSFVL LLGTTGCPRE LFLDLYRFIP TLTRTLLTSL 100
    GCGPGGAVVL RSGYRSLVLA CSLGVSLLLS YHQGLIPRPS GTQACCLTLS 150
    LMLASLSQFL S 161

    Note: Produced by alternative initiation from the subgenomic RNA.

    Length:161
    Mass (Da):17,553
    Last modified:October 11, 2004 - v1
    Checksum:i6AEBE896ACFD9F44
    GO
    Isoform Subgenomic capsid protein (identifier: Q672I1-2) [UniParc]FASTAAdd to Basket

    Also known as: VP1

    The sequence of this isoform can be found in the external entry Q672I1.
    Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.

    Note: Produced from the subgenomic RNA.

    Length:561
    Mass (Da):60,113
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY694184 Genomic RNA. Translation: AAU09266.1.
    RefSeqiYP_077279.1. NC_006269.1. [Q672I0-1]

    Genome annotation databases

    GeneIDi5176814.

    Keywords - Coding sequence diversityi

    Alternative initiation

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY694184 Genomic RNA. Translation: AAU09266.1 .
    RefSeqi YP_077279.1. NC_006269.1. [Q672I0-1 ]

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5176814.

    Family and domain databases

    InterProi IPR009949. Sapovirus_VP3.
    [Graphical view ]
    Pfami PF07349. DUF1478. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Structural and functional characterization of sapovirus RNA-dependent RNA polymerase."
      Fullerton S.W., Blaschke M., Coutard B., Gebhardt J., Gorbalenya A., Canard B., Tucker P.A., Rohayem J.
      J. Virol. 81:1858-1871(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP3_SVSAP
    AccessioniPrimary (citable) accession number: Q672I0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 2008
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3