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Protein

Uncharacterized protein VP3

Gene

ORF3

Organism
Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein VP3
Gene namesi
ORF Names:ORF3
OrganismiSapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
Taxonomic identifieri291175 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000007049 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003421161 – 161Uncharacterized protein VP3Add BLAST161

Proteomic databases

PRIDEiQ672I0

Family & Domainsi

Sequence similaritiesi

Belongs to the sapovirus VP3 family.Curated

Family and domain databases

InterProiView protein in InterPro
IPR009949 Sapovirus_VP3
PfamiView protein in Pfam
PF07349 DUF1478, 1 hit

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative promoter usage and alternative initiation. AlignAdd to basket

Isoform Uncharacterized protein VP3 (identifier: Q672I0-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MAPTQSQSRA TTRWSLTRLA QQVRPHPTLL LLIRSNPMGP HSAWSWLLPL
60 70 80 90 100
VQSNPMSLRQ YATALQSFVL LLGTTGCPRE LFLDLYRFIP TLTRTLLTSL
110 120 130 140 150
GCGPGGAVVL RSGYRSLVLA CSLGVSLLLS YHQGLIPRPS GTQACCLTLS
160
LMLASLSQFL S
Note: Produced by alternative initiation from the subgenomic RNA.
Length:161
Mass (Da):17,553
Last modified:October 11, 2004 - v1
Checksum:i6AEBE896ACFD9F44
GO
Isoform Subgenomic capsid protein (identifier: Q672I1-2) [UniParc]FASTAAdd to basket
Also known as: VP1
The sequence of this isoform can be found in the external entry Q672I1.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced from the subgenomic RNA by alternative promoter usage.
Length:561
Mass (Da):60,113
GO
Isoform Genome polyprotein (identifier: Q672I1-1) [UniParc]FASTAAdd to basket
The sequence of this isoform can be found in the external entry Q672I1.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced from the genomic RNA.
Length:2,280
Mass (Da):251,007
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY694184 Genomic RNA Translation: AAU09266.1
RefSeqiYP_077279.1, NC_006269.1 [Q672I0-1]

Genome annotation databases

GeneIDi5176814
KEGGivg:5176814

Keywords - Coding sequence diversityi

Alternative initiation, Alternative promoter usage

Similar proteinsi

Entry informationi

Entry nameiVP3_SVSAP
AccessioniPrimary (citable) accession number: Q672I0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: October 11, 2004
Last modified: May 23, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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