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Q672I0

- VP3_SVSAP

UniProt

Q672I0 - VP3_SVSAP

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Protein

Uncharacterized protein VP3

Gene

ORF3

Organism
Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein VP3
Gene namesi
ORF Names:ORF3
OrganismiSapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE)
Taxonomic identifieri291175 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeSapovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000007049: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 161161Uncharacterized protein VP3PRO_0000342116Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the sapovirus VP3 family.Curated

Family and domain databases

InterProiIPR009949. Sapovirus_VP3.
[Graphical view]
PfamiPF07349. DUF1478. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative initiation. Align

Isoform Uncharacterized protein VP3 (identifier: Q672I0) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MAPTQSQSRA TTRWSLTRLA QQVRPHPTLL LLIRSNPMGP HSAWSWLLPL
60 70 80 90 100
VQSNPMSLRQ YATALQSFVL LLGTTGCPRE LFLDLYRFIP TLTRTLLTSL
110 120 130 140 150
GCGPGGAVVL RSGYRSLVLA CSLGVSLLLS YHQGLIPRPS GTQACCLTLS
160
LMLASLSQFL S

Note: Produced by alternative initiation from the subgenomic RNA.

Length:161
Mass (Da):17,553
Last modified:October 11, 2004 - v1
Checksum:i6AEBE896ACFD9F44
GO
Isoform Subgenomic capsid protein (identifier: Q672I1-2) [UniParc]FASTAAdd to Basket

Also known as: VP1

The sequence of this isoform can be found in the external entry Q672I1.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.

Note: Produced from the subgenomic RNA.

Length:561
Mass (Da):60,113
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY694184 Genomic RNA. Translation: AAU09266.1.
RefSeqiYP_077279.1. NC_006269.1. [Q672I0-1]

Genome annotation databases

GeneIDi5176814.

Keywords - Coding sequence diversityi

Alternative initiation

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY694184 Genomic RNA. Translation: AAU09266.1 .
RefSeqi YP_077279.1. NC_006269.1. [Q672I0-1 ]

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5176814.

Family and domain databases

InterProi IPR009949. Sapovirus_VP3.
[Graphical view ]
Pfami PF07349. DUF1478. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Structural and functional characterization of sapovirus RNA-dependent RNA polymerase."
    Fullerton S.W., Blaschke M., Coutard B., Gebhardt J., Gorbalenya A., Canard B., Tucker P.A., Rohayem J.
    J. Virol. 81:1858-1871(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP3_SVSAP
AccessioniPrimary (citable) accession number: Q672I0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: October 11, 2004
Last modified: October 1, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3